Gut Microbes, Volume 16, Issue 1 (2024)

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Gut Microbes, Volume 16, Issue 1 (2024)

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Research Paper

Article
Human breastmilk-derived Bifidobacterium longum subsp. infantis CCFM1269 regulates bone formation by the GH/IGF axis through PI3K/AKT pathway
Mengfan Ding, Bowen Li, Haiqin Chen, Dong Liang, R. Paul Ross, Catherine Stanton, Jianxin Zhao, Wei Chen & Bo Yang
Article: 2290344
Published online: 20 Dec 2023
AbstractforHuman breastmilk-derived Bifidobacterium longum subsp. infantis CCFM1269 regulates bone formation by the GH/IGF axis through PI3K/AKT pathway | Full Text | References | PDF (11.6 MB) | EPUB | Supplemental
  • 6558 Views
  • 7 CrossRef citations
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Open Access
Article
Precocious infant fecal microbiome promotes enterocyte barrier dysfuction, altered neuroendocrine signaling and associates with increased childhood obesity risk
Germaine J. M. Yong, Cara E. Porsche, Alexandra R. Sitarik, Kei E. Fujimura, Kathryn McCauley, Dat T. Nguyen, Albert M. Levin, Kimberley J. Woodcroft, Dennis R. Ownby, Andrew G. Rundle, Christine C. Johnson, Andrea Cassidy-Bushrow & Susan V. Lynch
Article: 2290661
Published online: 20 Dec 2023
AbstractforPrecocious infant fecal microbiome promotes enterocyte barrier dysfuction, altered neuroendocrine signaling and associates with increased childhood obesity risk | Full Text | References | PDF (3 MB) | EPUB | Supplemental
  • 5146 Views
  • 3 CrossRef citations
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Open Access
Article
Opioid-induced dysbiosis of maternal gut microbiota during gestation alters offspring gut microbiota and pain sensitivity
Yaa F. Abu, Salma Singh, Junyi Tao, Irina Chupikova, Praveen Singh, Jingjing Meng & Sabita Roy
Article: 2292224
Published online: 18 Dec 2023
AbstractforOpioid-induced dysbiosis of maternal gut microbiota during gestation alters offspring gut microbiota and pain sensitivity | Full Text | References | PDF (3.7 MB) | EPUB | Supplemental
  • 10201 Views
  • 10 CrossRef citations
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Open Access
Article
Heterogeneous associations of gut microbiota with Crohn’s disease activity
Susanne Pinto, Elisa Benincà, Gianluca Galazzo, Daisy Jonkers, John Penders & Johannes A. Bogaards
Article: 2292239
Published online: 17 Dec 2023
AbstractforHeterogeneous associations of gut microbiota with Crohn’s disease activity | Full Text | References | PDF (8.1 MB) | EPUB | Supplemental
  • 3210 Views
  • 6 CrossRef citations
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Open Access
Article
The impact of gut microbiome enterotypes on ulcerative colitis: identifying key bacterial species and revealing species co-occurrence networks using machine learning
Xuangao Wu, Ting Zhang, TianShun Zhang & Sunmin Park
Article: 2292254
Published online: 20 Dec 2023
AbstractforThe impact of gut microbiome enterotypes on ulcerative colitis: identifying key bacterial species and revealing species co-occurrence networks using machine learning | Full Text | References | PDF (4.3 MB) | EPUB | Supplemental
  • 7105 Views
  • 15 CrossRef citations
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Open Access
Article
Cytolethal distending toxin B inoculation leads to distinct gut microtypes and IBS-D-like microRNA-mediated gene expression changes in a rodent model
Gabriela Leite, Juliana de Freitas Germano, Walter Morales, Stacy Weitsman, Gillian M Barlow, Gonzalo Parodi, Maya L Pimentel, Maria Jesus Villanueva-Millan, Maritza Sanchez, Sarah Ayyad, Ali Rezaie, Ruchi Mathur & Mark Pimentel
Article: 2293170
Published online: 18 Dec 2023
AbstractforCytolethal distending toxin B inoculation leads to distinct gut microtypes and IBS-D-like microRNA-mediated gene expression changes in a rodent model | Full Text | References | PDF (5.6 MB) | EPUB | Supplemental
  • 5822 Views
  • 5 CrossRef citations
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Open Access
Article
Fusobacterium nucleatum promotes inflammatory and anti-apoptotic responses in colorectal cancer cells via ADP-heptose release and ALPK1/TIFA axis activation
Camille Martin-Gallausiaux, Laurène Salesse, Diego Garcia-Weber, Ludovica Marinelli, Fabienne Beguet-Crespel, Vincent Brochard, Camille Le Gléau, Alexandre Jamet, Joël Doré, Hervé M. Blottière, Cécile Arrieumerlou & Nicolas Lapaque
Article: 2295384
Published online: 21 Dec 2023
AbstractforFusobacterium nucleatum promotes inflammatory and anti-apoptotic responses in colorectal cancer cells via ADP-heptose release and ALPK1/TIFA axis activation | Full Text | References | PDF (2.5 MB) | EPUB | Supplemental
  • 5520 Views
  • 18 CrossRef citations
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Open Access

Review

Review Article
The influence of the gut microbiome on ovarian aging
Feiling Huang, Ying Cao, Jinghui Liang, Ruiyi Tang, Si Wu, Peng Zhang & Rong Chen
Article: 2295394
Published online: 03 Jan 2024
AbstractforThe influence of the gut microbiome on ovarian aging | Full Text | References | PDF (1.8 MB) | EPUB
  • 11225 Views
  • 24 CrossRef citations
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Open Access

Research Paper

Article
Daily skin-to-skin contact alters microbiota development in healthy full-term infants
Henrik Andreas Eckermann, Jennifer Meijer, Kelly Cooijmans, Leo Lahti & Carolina de Weerth
Article: 2295403
Published online: 10 Jan 2024
AbstractforDaily skin-to-skin contact alters microbiota development in healthy full-term infants | Full Text | References | PDF (4.5 MB) | EPUB | Supplemental
  • 7342 Views
  • 12 CrossRef citations
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Open Access
Article
Gut microbiome responds to alteration in female sex hormone status and exacerbates metabolic dysfunction
Tzu-Wen L. Cross, Abigayle M. R. Simpson, Ching-Yen Lin, Natasha M. Hottmann, Aadra P. Bhatt, Samuel J. Pellock, Erik R. Nelson, Brett R. Loman, Matthew A. Wallig, Eugenio I. Vivas, Jan Suchodolski, Matthew R. Redinbo, Federico E. Rey & Kelly S. Swanson
Article: 2295429
Published online: 28 Dec 2023
AbstractforGut microbiome responds to alteration in female sex hormone status and exacerbates metabolic dysfunction | Full Text | References | PDF (2.5 MB) | EPUB | Supplemental
  • 9059 Views
  • 22 CrossRef citations
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Open Access

Review

Review Article
Diets intervene osteoporosis via gut-bone axis
Yuan-Wei Zhang, Pei-Ran Song, Si-Cheng Wang, Han Liu, Zhong-Min Shi & Jia-Can Su
Article: 2295432
Published online: 04 Jan 2024
AbstractforDiets intervene osteoporosis via gut-bone axis | Full Text | References | PDF (3.6 MB) | EPUB
  • 11091 Views
  • 51 CrossRef citations
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Open Access

Research Paper

Article
Microbiota and mucosal gene expression of fecal microbiota transplantation or placebo treated patients with chronic pouchitis
Anna K. Hartikainen, Imran Khan, Essi K. Karjalainen, Laura Renkonen-Sinisalo, Perttu Arkkila, Jonna Jalanka, Anna H. Lepistö & Reetta Satokari
Article: 2295445
Published online: 12 Jan 2024
AbstractforMicrobiota and mucosal gene expression of fecal microbiota transplantation or placebo treated patients with chronic pouchitis | Full Text | References | PDF (2.9 MB) | EPUB | Supplemental
  • 2813 Views
  • 4 CrossRef citations
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Open Access
Article
Colicins and T6SS-based competition systems enhance enterotoxigenic E. coli (ETEC) competitiveness
Jonas Kjellin, Danna Lee, Hans Steinsland, Rachel Dwane, Oda Barth Vedoy, Kurt Hanevik & Sanna Koskiniemi
Article: 2295891
Published online: 27 Dec 2023
AbstractforColicins and T6SS-based competition systems enhance enterotoxigenic E. coli (ETEC) competitiveness | Full Text | References | PDF (1.1 MB) | EPUB | Supplemental
  • 2987 Views
  • 5 CrossRef citations
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Open Access

Review

Review Article
Microbial collaborations and conflicts: unraveling interactions in the gut ecosystem
Shuang Wang, Lingyi Mu, Chong Yu, Yuting He, Xinliang Hu, Yanlei Jiao, Ziqiong Xu, Shaohui You, Shu-Lin Liu & Hongxia Bao
Article: 2296603
Published online: 27 Dec 2023
AbstractforMicrobial collaborations and conflicts: unraveling interactions in the gut ecosystem | Full Text | References | PDF (2.2 MB) | EPUB
  • 4907 Views
  • 26 CrossRef citations
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Open Access

Research Paper

Article
Evaluation of gut microbiota predictive potential associated with phenotypic characteristics to identify multifactorial diseases
Danielle Cristina Fonseca, Ilanna Marques Gomes da Rocha, Bianca Depieri Balmant, Leticia Callado, Ana Paula Aguiar Prudêncio, Juliana Tepedino Martins Alves, Raquel Susana Torrinhas, Gabriel da Rocha Fernandes & Dan Linetzky Waitzberg
Article: 2297815
Published online: 18 Jan 2024
AbstractforEvaluation of gut microbiota predictive potential associated with phenotypic characteristics to identify multifactorial diseases | Full Text | References | PDF (2.6 MB) | EPUB | Supplemental
  • 4503 Views
  • 6 CrossRef citations
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Open Access
Article
DSS treatment does not affect murine colonic microbiota in absence of the host
Jannike Lea Krause, Beatrice Engelmann, Stephanie Serena Schaepe, Ulrike Rolle-Kampczyk, Nico Jehmlich, Hyun-Dong Chang, Ulla Slanina, Maximillian Hoffman, Jörg Lehmann, Ana Claudia Zenclussen, Gunda Herberth, Martin von Bergen & Sven-Bastiaan Haange
Article: 2297831
Published online: 02 Jan 2024
AbstractforDSS treatment does not affect murine colonic microbiota in absence of the host | Full Text | References | PDF (5.5 MB) | EPUB | Supplemental
  • 4223 Views
  • 3 CrossRef citations
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Open Access
Article
Influence of age, socioeconomic status, and location on the infant gut resistome across populations
Dhrati V. Patangia, Ghjuvan Grimaud, Shaopu Wang, R. Paul Ross & Catherine Stanton
Article: 2297837
Published online: 13 Jan 2024
AbstractforInfluence of age, socioeconomic status, and location on the infant gut resistome across populations | Full Text | References | PDF (6.3 MB) | EPUB | Supplemental
  • 3056 Views
  • 2 CrossRef citations
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Open Access
Article
B. thetaiotaomicron-derived acetic acid modulate immune microenvironment and tumor growth in hepatocellular carcinoma
Hongbin Ma, Liang Yang, Yingchao Liang, Fenghua Liu, Jinxiang Hu, Rui Zhang, Yong Li, Lei Yuan & Feiling Feng
Article: 2297846
Published online: 25 Jan 2024
AbstractforB. thetaiotaomicron-derived acetic acid modulate immune microenvironment and tumor growth in hepatocellular carcinoma | Full Text | References | PDF (4 MB) | EPUB | Supplemental
  • 4663 Views
  • 14 CrossRef citations
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Open Access
Article
A gut aging clock using microbiome multi-view profiles is associated with health and frail risk
Hongchao Wang, Yutao Chen, Ling Feng, Shourong Lu, Jinlin Zhu, Jianxin Zhao, Hao Zhang, Wei Chen & Wenwei Lu
Article: 2297852
Published online: 30 Jan 2024
AbstractforA gut aging clock using microbiome multi-view profiles is associated with health and frail risk | Full Text | References | PDF (5.3 MB) | EPUB
  • 3735 Views
  • 6 CrossRef citations
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Open Access

Review

Review Article
Multi-omic approaches for host-microbiome data integration
Ashwin Chetty & Ran Blekhman
Article: 2297860
Published online: 02 Jan 2024
AbstractforMulti-omic approaches for host-microbiome data integration | Full Text | References | PDF (1.2 MB) | EPUB
  • 8703 Views
  • 21 CrossRef citations
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Open Access
Review Article
Elucidating the role of diet in maintaining gut health to reduce the risk of obesity, cardiovascular and other age-related inflammatory diseases: recent challenges and future recommendations
Tariq Aziz, Nageen Hussain, Zunaira Hameed & Lin Lin
Article: 2297864
Published online: 04 Jan 2024
AbstractforElucidating the role of diet in maintaining gut health to reduce the risk of obesity, cardiovascular and other age-related inflammatory diseases: recent challenges and future recommendations | Full Text | References | PDF (6 MB) | EPUB
  • 10870 Views
  • 78 CrossRef citations
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Open Access

Research Paper

Article
Hyperbaric oxygen augments susceptibility to C. difficile infection by impairing gut microbiota ability to stimulate the HIF-1α-IL-22 axis in ILC3
José L. Fachi, Laís. P. Pral, Helder C. Assis, Sarah Oliveira, Vinícius R. Rodovalho, Jefferson A. C. dos Santos, Mariane F. Fernandes, Valquíria A. Matheus, Renata Sesti-Costa, Paulo J. Basso, Marina Flóro e Silva, Niels O. S. Câmara, Selma Giorgio, Marco Colonna & Marco A. R. Vinolo
Article: 2297872
Published online: 02 Jan 2024
AbstractforHyperbaric oxygen augments susceptibility to C. difficile infection by impairing gut microbiota ability to stimulate the HIF-1α-IL-22 axis in ILC3 | Full Text | References | PDF (8.3 MB) | EPUB | Supplemental
  • 5051 Views
  • 7 CrossRef citations
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Open Access
Article
Cryptosporidium infection of human small intestinal epithelial cells induces type III interferon and impairs infectivity of Rotavirus
Valentin Greigert, Iti Saraav, Juhee Son, Yinxing Zhu, Denise Dayao, Avan Antia, Saul Tzipori, William H. Witola, Thaddeus S. Stappenbeck, Siyuan Ding & L. David Sibley
Article: 2297897
Published online: 08 Jan 2024
AbstractforCryptosporidium infection of human small intestinal epithelial cells induces type III interferon and impairs infectivity of Rotavirus | Full Text | References | PDF (4 MB) | EPUB | Supplemental
  • 3734 Views
  • 9 CrossRef citations
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Open Access
Article
Pasteurized Akkermansia muciniphila improves irritable bowel syndrome-like symptoms and related behavioral disorders in mice
Maëva Meynier, Valentine Daugey, Geoffroy Mallaret, Sandie Gervason, Mathieu Meleine, Julie Barbier, Youssef Aissouni, Stéphane Lolignier, Mathilde Bonnet, Denis Ardid, Willem M. De Vos, Matthias Van Hul, Peter Suenaert, Amandine Brochot, Patrice D. Cani & Frédéric A. Carvalho
Article: 2298026
Published online: 03 Jan 2024
AbstractforPasteurized Akkermansia muciniphila improves irritable bowel syndrome-like symptoms and related behavioral disorders in mice | Full Text | References | PDF (2.5 MB) | EPUB | Supplemental
  • 7534 Views
  • 28 CrossRef citations
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Open Access
Article
Collinsella aerofaciens as a predictive marker of response to probiotic treatment in non-constipated irritable bowel syndrome
Giorgio Gargari, Giacomo Mantegazza, Cesare Cremon, Valentina Taverniti, Alice Valenza, Maria Raffaella Barbaro, Giovanni Marasco, Robin Duncan, Walter Fiore, Roberto Ferrari, Valerio De Vitis, Giovanni Barbara, Simone Guglielmetti & on behalf of the PROBE-IBS/2 group
Article: 2298246
Published online: 04 Jan 2024
AbstractforCollinsella aerofaciens as a predictive marker of response to probiotic treatment in non-constipated irritable bowel syndrome | Full Text | References | PDF (3.4 MB) | EPUB | Supplemental
  • 6190 Views
  • 18 CrossRef citations
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Open Access
Article
Isolation and characterization of a novel lytic Parabacteroides distasonis bacteriophage φPDS1 from the human gut
Adrián Cortés-Martín, Rémi Denise, Emma Guerin, Stephen R. Stockdale, Lorraine A. Draper, R. Paul Ross, Andrey N. Shkoporov & Colin Hill
Article: 2298254
Published online: 04 Jan 2024
AbstractforIsolation and characterization of a novel lytic Parabacteroides distasonis bacteriophage φPDS1 from the human gut | Full Text | References | PDF (5 MB) | EPUB | Supplemental
  • 3638 Views
  • 2 CrossRef citations
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Open Access
Article
Microbiome function and neurodevelopment in Black infants: vitamin B12 emerges as a key factor
Kaitlyn Oliphant, Wilfredo Cruz Ayala, Rimma Ilyumzhinova, Kimberley Mbayiwa, Anna Sroka, Bingqing Xie, Bree Andrews, Kate Keenan & Erika C. Claud
Article: 2298697
Published online: 01 Feb 2024
AbstractforMicrobiome function and neurodevelopment in Black infants: vitamin B12 emerges as a key factor | Full Text | References | PDF (6.9 MB) | EPUB | Supplemental
  • 2934 Views
  • 2 CrossRef citations
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Open Access
Article
Gut microbiome-derived butyrate inhibits the immunosuppressive factors PD-L1 and IL-10 in tumor-associated macrophages in gastric cancer
Seung Yoon Lee, JooYeon Jhun, Jin Seok Woo, Kun Hee Lee, Sun-Hee Hwang, Jeonghyeon Moon, Goeun Park, Sun Shim Choi, So Jung Kim, Yoon Ju Jung, Kyo Young Song & Mi-La Cho
Article: 2300846
Published online: 10 Jan 2024
AbstractforGut microbiome-derived butyrate inhibits the immunosuppressive factors PD-L1 and IL-10 in tumor-associated macrophages in gastric cancer | Full Text | References | PDF (21.4 MB) | EPUB | Supplemental
  • 8321 Views
  • 26 CrossRef citations
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Open Access
Article
Bifidobacterium alleviate metabolic disorders via converting methionine to 5’-methylthioadenosine
Qiang Lyu, Rou-An Chen, Hsiao-Li Chuang, Hsin-Bai Zou, Lihong Liu, Li-Kang Sung, Po-Yu Liu, Hsin-Yi Wu, Hsin-Yuan Chang, Wan-Ju Cheng, Wei-Kai Wu, Ming-Shiang Wu & Cheng-Chih Hsu
Article: 2300847
Published online: 04 Mar 2024
AbstractforBifidobacterium alleviate metabolic disorders via converting methionine to 5’-methylthioadenosine | Full Text | References | PDF (8.1 MB) | EPUB | Supplemental
  • 4438 Views
  • 6 CrossRef citations
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Open Access
Article
Anti-S-layer monoclonal antibodies impact Clostridioides difficile physiology
Lise Hunault, Emile Auria, Patrick England, Julien Deschamps, Romain Briandet, Vanessa Kremer, Bruno Iannascoli, Léo Vidal-Maison, Chunguang Guo, Lynn Macdonald, Séverine Péchiné, Cécile Denève-Larrazet, Bruno Dupuy, Guy Gorochov, Pierre Bruhns & Delphine Sterlin
Article: 2301147
Published online: 30 Jan 2024
AbstractforAnti-S-layer monoclonal antibodies impact Clostridioides difficile physiology | Full Text | References | PDF (2.2 MB) | EPUB | Supplemental
  • 2297 Views
  • 1 CrossRef citations
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Open Access
Article
Prophylactic treatment with Bacteroides uniformis and Bifidobacterium bifidum counteracts hepatic NK cell immune tolerance in nonalcoholic steatohepatitis induced by high fat diet
Jingyuan Xu, Qiaoyun Xia, Ting Wu, Yong Shao, Yatao Wang, Nuyun Jin, Peiying Tian, Longyun Wu & Xiaolan Lu
Article: 2302065
Published online: 09 Jan 2024
AbstractforProphylactic treatment with Bacteroides uniformis and Bifidobacterium bifidum counteracts hepatic NK cell immune tolerance in nonalcoholic steatohepatitis induced by high fat diet | Full Text | References | PDF (5.1 MB) | EPUB | Supplemental
  • 4228 Views
  • 7 CrossRef citations
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Open Access
Article
Incorporating metabolic activity, taxonomy and community structure to improve microbiome-based predictive models for host phenotype prediction
Mahsa Monshizadeh & Yuzhen Ye
Article: 2302076
Published online: 12 Jan 2024
AbstractforIncorporating metabolic activity, taxonomy and community structure to improve microbiome-based predictive models for host phenotype prediction | Full Text | References | PDF (1.4 MB) | EPUB | Supplemental
  • 3198 Views
  • 1 CrossRef citations
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Open Access
Article
Gut microbiota-driven metabolic alterations reveal gut–brain communication in Alzheimer’s disease model mice
Yijing Chen, Yinhu Li, Yingying Fan, Shuai Chen, Li Chen, Yuewen Chen & Yu Chen
Article: 2302310
Published online: 23 Jan 2024
AbstractforGut microbiota-driven metabolic alterations reveal gut–brain communication in Alzheimer’s disease model mice | Full Text | References | PDF (4.4 MB) | EPUB | Supplemental
  • 7924 Views
  • 19 CrossRef citations
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Open Access

Review

Review Article
The contribution of age-related changes in the gut-brain axis to neurological disorders
Romeesa Khan, Claudia M. Di Gesù, Juneyoung Lee & Louise D. McCullough
Article: 2302801
Published online: 18 Jan 2024
AbstractforThe contribution of age-related changes in the gut-brain axis to neurological disorders | Full Text | References | PDF (3.4 MB) | EPUB
  • 7520 Views
  • 13 CrossRef citations
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Open Access

Research Paper

Article
Disruption of gut barrier integrity and host–microbiome interactions underlie MASLD severity in patients with type-2 diabetes mellitus
R. Forlano, L. Martinez-Gili, P. Takis, J. Miguens-Blanco, T. Liu, E. Triantafyllou, C. Skinner, R Loomba, M. Thursz, J. R. Marchesi, B.H. Mullish & P. Manousou
Article: 2304157
Published online: 18 Jan 2024
AbstractforDisruption of gut barrier integrity and host–microbiome interactions underlie MASLD severity in patients with type-2 diabetes mellitus | Full Text | References | PDF (1.2 MB) | EPUB | Supplemental
  • 5688 Views
  • 11 CrossRef citations
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Open Access
Article
Longitudinal analysis of the gut microbiome in adolescent patients with anorexia nervosa: microbiome-related factors associated with clinical outcome
Nadia Andrea Andreani, Arunabh Sharma, Brigitte Dahmen, Hannah E. Specht, Nina Mannig, Vanessa Ruan, Lara Keller, John F. Baines, Beate Herpertz-Dahlmann, Astrid Dempfle & Jochen Seitz
Article: 2304158
Published online: 31 Jan 2024
AbstractforLongitudinal analysis of the gut microbiome in adolescent patients with anorexia nervosa: microbiome-related factors associated with clinical outcome | Full Text | References | PDF (3.7 MB) | EPUB | Supplemental
  • 4193 Views
  • 17 CrossRef citations
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Open Access
Article
Bacteroides thetaiotaomicron ameliorates mouse hepatic steatosis through regulating gut microbial composition, gut-liver folate and unsaturated fatty acids metabolism
Hu Li, Xue-Kai Wang, Mei Tang, Lei Lei, Jian-Rui Li, Han Sun, Jing Jiang, Biao Dong, Hong-Ying Li, Jian-Dong Jiang & Zong-Gen Peng
Article: 2304159
Published online: 26 Jan 2024
AbstractforBacteroides thetaiotaomicron ameliorates mouse hepatic steatosis through regulating gut microbial composition, gut-liver folate and unsaturated fatty acids metabolism | Full Text | References | PDF (5.4 MB) | EPUB
  • 6500 Views
  • 25 CrossRef citations
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Open Access
Article
Tunable control of B. infantis abundance and gut metabolites by co-administration of human milk oligosaccharides
Abigail L. Reens, Casey M. Cosetta, Russell Saur, Olivia Trofimuk, Sarah L. Brooker, Martin L. Lee, Adam K. Sun, Gregory J. McKenzie & Julie E. Button
Article: 2304160
Published online: 18 Jan 2024
AbstractforTunable control of B. infantis abundance and gut metabolites by co-administration of human milk oligosaccharides | Full Text | References | PDF (3.1 MB) | EPUB
  • 3379 Views
  • 4 CrossRef citations
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Open Access
Article
Meta-analysis reveals obesity associated gut microbial alteration patterns and reproducible contributors of functional shift
Deep Chanda & Debojyoti De
Article: 2304900
Published online: 24 Jan 2024
AbstractforMeta-analysis reveals obesity associated gut microbial alteration patterns and reproducible contributors of functional shift | Full Text | References | PDF (15.1 MB) | EPUB | Supplemental
  • 6426 Views
  • 18 CrossRef citations
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Open Access
Article
A synthetic microbial consortium protects against obesity by regulating vitamin B6 metabolism
Xiuzhao Chen, Mengxue Gao, Lina Wang, Guifen Qiang, Yili Wu, He Huang & Guangbo Kang
Article: 2304901
Published online: 25 Jan 2024
AbstractforA synthetic microbial consortium protects against obesity by regulating vitamin B6 metabolism | Full Text | References | PDF (6.5 MB) | EPUB | Supplemental
  • 3527 Views
  • 8 CrossRef citations
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Open Access
Article
Antibiotic-induced gut dysbiosis elicits gut-brain axis relevant multi-omic signatures and behavioral and neuroendocrine changes in a nonhuman primate model
Shivdeep S. Hayer, Mackenzie Conrin, Jeffrey A. French, Andrew K. Benson, Sophie Alvarez, Kathryn Cooper, Anne Fischer, Zahraa Wajih Alsafwani, William Gasper, Mallory J. Suhr Van Haute, Haley R. Hassenstab, Shayda Azadmanesh, Missy Briardy, Skyler Gerbers, Aliyah Jabenis, Jennifer L. Thompson & Jonathan B. Clayton
Article: 2305476
Published online: 29 Jan 2024
AbstractforAntibiotic-induced gut dysbiosis elicits gut-brain axis relevant multi-omic signatures and behavioral and neuroendocrine changes in a nonhuman primate model | Full Text | References | PDF (5.5 MB) | EPUB | Supplemental
  • 3954 Views
  • 8 CrossRef citations
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Open Access

Commentary and Views

Comment
Direct evidence of host-mediated glycosylation of NleA and its dependence on interaction with the COPII complex
Lindsay Burns, François Le Mauff & Samantha Gruenheid
Article: 2305477
Published online: 01 Feb 2024
AbstractforDirect evidence of host-mediated glycosylation of NleA and its dependence on interaction with the COPII complex | Full Text | References | PDF (493.1 KB) | EPUB
  • 1792 Views
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Open Access

Review

Review Article
Exploring substrate–microbe interactions: a metabiotic approach toward developing targeted synbiotic compositions
Bodo Speckmann, Ellen Ehring, Jiaying Hu & Ana Rodriguez Mateos
Article: 2305716
Published online: 01 Feb 2024
AbstractforExploring substrate–microbe interactions: a metabiotic approach toward developing targeted synbiotic compositions | Full Text | References | PDF (3.6 MB) | EPUB
  • 3521 Views
  • 8 CrossRef citations
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Open Access

Research Paper

Article
Gut microbiota modulate CD8+ T cell immunity in gastric cancer through Butyrate/GPR109A/HOPX
Xiang Yu, Jinzhou Ou, Lingzhi Wang, Zhenyuan Li, Yingxin Ren, Lang Xie, Zhian Chen, Junxian Liang, Guodong Shen, Zhaowei Zou, Cuiyin Zhao, Guoxin Li & Yanfeng Hu
Article: 2307542
Published online: 06 Feb 2024
AbstractforGut microbiota modulate CD8+ T cell immunity in gastric cancer through Butyrate/GPR109A/HOPX | Full Text | References | PDF (10 MB) | EPUB | Supplemental
  • 6919 Views
  • 28 CrossRef citations
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Open Access
Article
Gut microbiota-derived indole compounds attenuate metabolic dysfunction-associated steatotic liver disease by improving fat metabolism and inflammation
Byeong Hyun Min, Shivani Devi, Goo Hyun Kwon, Haripriya Gupta, Jin-Ju Jeong, Satya Priya Sharma, Sung-Min Won, Ki-Kwang Oh, Sang Jun Yoon, Hee Jin Park, Jung A Eom, Min Kyo Jeong, Ji Ye Hyun, Nattan Stalin, Tae-Sik Park, Jieun Choi, Do Yup Lee, Sang Hak Han, Dong Joon Kim & Ki Tae Suk
Article: 2307568
Published online: 01 Feb 2024
AbstractforGut microbiota-derived indole compounds attenuate metabolic dysfunction-associated steatotic liver disease by improving fat metabolism and inflammation | Full Text | References | PDF (6.6 MB) | EPUB | Supplemental
  • 8864 Views
  • 31 CrossRef citations
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Open Access

Commentary and View

Comment
Microbial stars: shedding light on gut microbes’ role in insulin resistance and innovative diabetes therapies
Jinwei Zhang
Article: 2307581
Published online: 26 Jan 2024
AbstractforMicrobial stars: shedding light on gut microbes’ role in insulin resistance and innovative diabetes therapies | Full Text | References | PDF (739.2 KB) | EPUB
  • 2250 Views
  • 2 CrossRef citations
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Open Access

Research Paper

Article
Fungal signature differentiates alcohol-associated liver disease from nonalcoholic fatty liver disease
Greta Viebahn, Phillipp Hartmann, Sonja Lang, Münevver Demir, Xinlian Zhang, Derrick E. Fouts, Peter Stärkel & Bernd Schnabl
Article: 2307586
Published online: 01 Feb 2024
AbstractforFungal signature differentiates alcohol-associated liver disease from nonalcoholic fatty liver disease | Full Text | References | PDF (4 MB) | EPUB | Supplemental
  • 2924 Views
  • 4 CrossRef citations
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Open Access
Article
Citrobacter rodentium possesses a functional type II secretion system necessary for successful host infection
Z Krekhno, SE Woodward, A Serapio-Palacios, J Peña-Díaz, KM Moon, LJ Foster & BB Finlay
Article: 2308049
Published online: 01 Feb 2024
AbstractforCitrobacter rodentium possesses a functional type II secretion system necessary for successful host infection | Full Text | References | PDF (1.7 MB) | EPUB | Supplemental
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Introduction

Introduction
The IBS bug-pain connection
Elena F Verdu & Stephen Vanner
Article: 2308956
Published online: 08 Feb 2024
CitationforThe IBS bug-pain connection | Full Text | References | PDF (184.9 KB) | EPUB
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Research Paper

Article
Effects of breastfeeding on children’s gut colonization with multidrug-resistant Enterobacterales in peri-urban Lima, Peru
Maya L. Nadimpalli, Luismarcelo Rojas Salvatierra, Subhra Chakraborty, Jenna M. Swarthout, Lilia Z. Cabrera, Amy J. Pickering, Maritza Calderon, Mayuko Saito, Robert H. Gilman & Monica J. Pajuelo
Article: 2309681
Published online: 01 Feb 2024
AbstractforEffects of breastfeeding on children’s gut colonization with multidrug-resistant Enterobacterales in peri-urban Lima, Peru | Full Text | References | PDF (1.1 MB) | EPUB | Supplemental
  • 2182 Views
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Article
Lack of gut microbiome recovery with spinal cord injury rehabilitation
Ayelet Gur Arie, Itamar Toren, Rotem Hadar, Tzipi Braun, Gilat Efroni, Efrat Glick Saar, Zecharia Madar, Amnon Amir, Gabriel Zeilig & Yael Haberman
Article: 2309682
Published online: 07 Feb 2024
AbstractforLack of gut microbiome recovery with spinal cord injury rehabilitation | Full Text | References | PDF (2.6 MB) | EPUB | Supplemental
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Article
Phocaeicola vulgatus alleviates diet-induced metabolic dysfunction-associated steatotic liver disease progression by downregulating histone acetylation level via 3-HPAA
Shengxi Jin, Peng Chen, Jing Yang, Duguang Li, Xiaolong Liu, Yiyin Zhang, Qiming Xia, Yiling Li, Guoqiao Chen, Yixuan Li, Yifan Tong, Weihua Yu, Xiaoxiao Fan & Hui Lin
Article: 2309683
Published online: 05 Feb 2024
AbstractforPhocaeicola vulgatus alleviates diet-induced metabolic dysfunction-associated steatotic liver disease progression by downregulating histone acetylation level via 3-HPAA | Full Text | References | PDF (6.4 MB) | EPUB | Supplemental
  • 4798 Views
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Article
A universe of human gut-derived bacterial prophages: unveiling the hidden viral players in intestinal microecology
Zhangming Pei, Yufei Liu, Yutao Chen, Tong Pan, Xihao Sun, Hongchao Wang, R. Paul Ross, Wenwei Lu & Wei Chen
Article: 2309684
Published online: 01 Feb 2024
AbstractforA universe of human gut-derived bacterial prophages: unveiling the hidden viral players in intestinal microecology | Full Text | References | PDF (8.9 MB) | EPUB | Supplemental
  • 3490 Views
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Article
Colibactin-producing Escherichia coli enhance resistance to chemotherapeutic drugs by promoting epithelial to mesenchymal transition and cancer stem cell emergence
Guillaume Dalmasso, Antony Cougnoux, Tiphanie Faïs, Virginie Bonnin, Benoit Mottet-Auselo, Hang TT Nguyen, Pierre Sauvanet, Nicolas Barnich, Marine Jary, Denis Pezet, Julien Delmas & Richard Bonnet
Article: 2310215
Published online: 19 Feb 2024
AbstractforColibactin-producing Escherichia coli enhance resistance to chemotherapeutic drugs by promoting epithelial to mesenchymal transition and cancer stem cell emergence | Full Text | References | PDF (4.2 MB) | EPUB | Supplemental
  • 2795 Views
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Article
Vancomycin relieves tacrolimus-induced hyperglycemia by eliminating gut bacterial beta-glucuronidase enzyme activity
Peixia Li, Rui Zhang, Jinping Zhou, Pengpeng Guo, Yani Liu & Shaojun Shi
Article: 2310277
Published online: 08 Feb 2024
AbstractforVancomycin relieves tacrolimus-induced hyperglycemia by eliminating gut bacterial beta-glucuronidase enzyme activity | Full Text | References | PDF (11.3 MB) | EPUB | Supplemental
  • 3488 Views
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Article
Prescription opioids induced microbial dysbiosis worsens severity of chronic pancreatitis and drives pain hypersensitivity
Kousik Kesh, Junyi Tao, Nillu Ghosh, Richa Jalodia, Salma Singh, Rajinder Dawra & Sabita Roy
Article: 2310291
Published online: 08 Feb 2024
AbstractforPrescription opioids induced microbial dysbiosis worsens severity of chronic pancreatitis and drives pain hypersensitivity | Full Text | References | PDF (3.9 MB) | EPUB | Supplemental
  • 4401 Views
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Article
Repeated (S)-ketamine administration ameliorates the spatial working memory impairment in mice with chronic pain: role of the gut microbiota–brain axis
Yubin Jiang, Xingming Wang, Jiawei Chen, Yibao Zhang, Kenji Hashimoto, Jian-Jun Yang & Zhiqiang Zhou
Article: 2310603
Published online: 08 Feb 2024
AbstractforRepeated (S)-ketamine administration ameliorates the spatial working memory impairment in mice with chronic pain: role of the gut microbiota–brain axis | Full Text | References | PDF (5.9 MB) | EPUB | Supplemental
  • 3278 Views
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Article
Integrated multi-omics reveal gut microbiota-mediated bile acid metabolism alteration regulating immunotherapy responses to anti-α4β7-integrin in Crohn’s disease
Bing Han, Daiyuan Tang, Xiaodan Lv, Junhua Fan, Shiquan Li, Hui Zhu, Jiatong Zhang, Shang Xu, Xiaofang Xu, Ziqian Huang, Zhixi Huang, Guangfu Lin, Lingling Zhan & Xiaoping Lv
Article: 2310894
Published online: 05 Feb 2024
AbstractforIntegrated multi-omics reveal gut microbiota-mediated bile acid metabolism alteration regulating immunotherapy responses to anti-α4β7-integrin in Crohn’s disease | Full Text | References | PDF (18.6 MB) | EPUB | Supplemental
  • 3784 Views
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Article
Gut microbiota-derived trimethylamine N-Oxide: a novel target for the treatment of preeclampsia
Jiayi Wang, Yajie Gao, Shuaijun Ren, Jialin Li, Siqian Chen, Jiating Feng, Bing He, Yuping Zhou & Rongrong Xuan
Article: 2311888
Published online: 13 Feb 2024
AbstractforGut microbiota-derived trimethylamine N-Oxide: a novel target for the treatment of preeclampsia | Full Text | References | PDF (9.7 MB) | EPUB | Supplemental
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Article
Gut microbiota regulates host melatonin production through epithelial cell MyD88
Bingnan Liu, Lijuan Fan, Youxia Wang, Hao Wang, Yuqi Yan, Shuai Chen, Ifen Hung, Chunxue Liu, Hong Wei, Liangpeng Ge & Wenkai Ren
Article: 2313769
Published online: 14 Feb 2024
AbstractforGut microbiota regulates host melatonin production through epithelial cell MyD88 | Full Text | References | PDF (5.7 MB) | EPUB | Supplemental
  • 5135 Views
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Article
Weizmannia coagulans BCF-01: a novel gastrogenic probiotic for Helicobacter pylori infection control
Zhenhui Chen, Ziyu Tang, Wendan Li, Xiaoshi Deng, Lu Yu, Jixiang Yang, Jiaxin Liu, Yunshui Cheng, Wanwen Huang, Xiaotong Guo, Jiamin Shan, Daixuan Zhou, Weisen Zeng, Yang Bai & Hongying Fan
Article: 2313770
Published online: 09 Feb 2024
AbstractforWeizmannia coagulans BCF-01: a novel gastrogenic probiotic for Helicobacter pylori infection control | Full Text | References | PDF (8.1 MB) | EPUB | Supplemental
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Review

Review Article
The Helicobacter pylori cag pathogenicity island as a determinant of gastric cancer risk
Sirena C. Tran, Kaeli N. Bryant & Timothy L. Cover
Article: 2314201
Published online: 23 Feb 2024
AbstractforThe Helicobacter pylori cag pathogenicity island as a determinant of gastric cancer risk | Full Text | References | PDF (1.5 MB) | EPUB
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Research Paper

Article
The biotherapeutic Clostridium butyricum MIYAIRI 588 strain potentiates enterotropism of Rorγt+Treg and PD-1 blockade efficacy
Thomas Paz Del Socorro, Kentaro Oka, Olivier Boulard, Motomichi Takahashi, Lionel Franz Poulin, Atsushi Hayashi & Mathias Chamaillard
Article: 2315631
Published online: 22 Feb 2024
AbstractforThe biotherapeutic Clostridium butyricum MIYAIRI 588 strain potentiates enterotropism of Rorγt+Treg and PD-1 blockade efficacy | Full Text | References | PDF (3.5 MB) | EPUB | Supplemental
  • 4479 Views
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Article
Dietary resistant starch supplementation increases gut luminal deoxycholic acid abundance in mice
Melanie A. Reuter, Madelynn Tucker, Zara Marfori, Rahaf Shishani, Jessica Miranda Bustamante, Rosalinda Moreno, Michael L. Goodson, Allison Ehrlich, Ameer Y. Taha, Pamela J. Lein, Nikhil Joshi, Ilana Brito, Blythe Durbin-Johnson, Renu Nandakumar & Bethany P. Cummings
Article: 2315632
Published online: 20 Feb 2024
AbstractforDietary resistant starch supplementation increases gut luminal deoxycholic acid abundance in mice | Full Text | References | PDF (3.4 MB) | EPUB | Supplemental
  • 3366 Views
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Article
Gut enterotype-dependent modulation of gut microbiota and their metabolism in response to xanthohumol supplementation in healthy adults
Paige E. Jamieson, Eli B. Smart, John A. Bouranis, Jaewoo Choi, Robert E. Danczak, Carmen P. Wong, Ines L. Paraiso, Claudia S. Maier, Emily Ho, Thomas J. Sharpton, Thomas O. Metz, Ryan Bradley & Jan F. Stevens
Article: 2315633
Published online: 15 Feb 2024
AbstractforGut enterotype-dependent modulation of gut microbiota and their metabolism in response to xanthohumol supplementation in healthy adults | Full Text | References | PDF (2.9 MB) | EPUB | Supplemental
  • 3789 Views
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Article
Probiotic Lactobacillus spp. improves Drosophila memory by increasing lactate dehydrogenase levels in the brain mushroom body neurons
Shuk-Man Ho, Wan-Hua Tsai, Chih-Ho Lai, Meng-Hsuan Chiang, Wang-Pao Lee, Hui-Yu Wu, Pei-Yi Bai, Tony Wu & Chia-Lin Wu
Article: 2316533
Published online: 19 Feb 2024
AbstractforProbiotic Lactobacillus spp. improves Drosophila memory by increasing lactate dehydrogenase levels in the brain mushroom body neurons | Full Text | References | PDF (3.6 MB) | EPUB | Supplemental
  • 3472 Views
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Article
A tailored series of engineered yeasts for the cell-dependent treatment of inflammatory bowel disease by rational butyrate supplementation
Jiahao Wu, He Huang, Lina Wang, Mengxue Gao, Shuxian Meng, Shaolan Zou, Yuanhang Feng, Zeling Feng, Zhixin Zhu, Xiaocang Cao, Bingzhi Li & Guangbo Kang
Article: 2316575
Published online: 21 Feb 2024
AbstractforA tailored series of engineered yeasts for the cell-dependent treatment of inflammatory bowel disease by rational butyrate supplementation | Full Text | References | PDF (7 MB) | EPUB | Supplemental
  • 3586 Views
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Article
S-amlodipine induces liver inflammation and dysfunction through the alteration of intestinal microbiome in a rat model
Xinxin Liu, Hui Fang, Liuzhu Pan, Peng Zhang, Huai Lin, Huihui Gao, Chaolin Ye, Daqing Mao & Yi Luo
Article: 2316923
Published online: 24 Feb 2024
AbstractforS-amlodipine induces liver inflammation and dysfunction through the alteration of intestinal microbiome in a rat model | Full Text | References | PDF (9.8 MB) | EPUB | Supplemental
  • 3190 Views
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Commentary and View

Comment
From a hunger-regulating hormone to an antimicrobial peptide: gastrointestinal derived circulating endocrine hormone-peptide YY exerts exocrine antimicrobial effects against selective gut microbiota
Yuchen Xiao, Lingjing Jin & Chao Zhang
Article: 2316927
Published online: 14 Feb 2024
First Page PreviewforFrom a hunger-regulating hormone to an antimicrobial peptide: gastrointestinal derived circulating endocrine hormone-peptide YY exerts exocrine antimicrobial effects against selective gut microbiota | Full Text | References | PDF (2.5 MB) | EPUB
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Research Paper

Article
Salmonella enterica serovar Typhimurium remodels mitochondrial dynamics of macrophages via the T3SS effector SipA to promote intracellular proliferation
Xingmei Liu, Yutao Liu, Xinyu Zhao, Xueping Li, Ting Yao, Ruiying Liu, Qian Wang, Qiushi Wang, Dan Li, Xintong Chen, Bin Liu & Lu Feng
Article: 2316932
Published online: 14 Feb 2024
AbstractforSalmonella enterica serovar Typhimurium remodels mitochondrial dynamics of macrophages via the T3SS effector SipA to promote intracellular proliferation | Full Text | References | PDF (4.6 MB) | EPUB | Supplemental
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Article
The intestinal microbiome of inflammatory bowel disease across the pediatric age range
Máire A. Conrad, Kyle Bittinger, Yue Ren, Kelly Kachelries, Jennifer Vales, Hongzhe Li, Gary D. Wu, Frederic D. Bushman, Marcella Devoto, Robert N Baldassano & Judith R. Kelsen
Article: 2317932
Published online: 25 Feb 2024
AbstractforThe intestinal microbiome of inflammatory bowel disease across the pediatric age range | Full Text | References | PDF (3.1 MB) | EPUB | Supplemental
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Article
Chemotherapy-induced microbiota exacerbates the toxicity of chemotherapy through the suppression of interleukin-10 from macrophages
Zhen He, Hongyu Xie, Haoyang Xu, Jinjie Wu, Wanyi Zeng, Qilang He, Christian Jobin, Sanqing Jin & Ping Lan
Article: 2319511
Published online: 24 Feb 2024
AbstractforChemotherapy-induced microbiota exacerbates the toxicity of chemotherapy through the suppression of interleukin-10 from macrophages | Full Text | References | PDF (8.6 MB) | EPUB | Supplemental
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Article
Regulation of colonic neuropeptide Y expression by the gut microbiome in patients with ulcerative colitis and its association with anxiety- and depression-like behavior in mice
Min-Kyung Joo, Jae-Won Lee, Jeong-Hwa Woo, Hyo-Jong Kim, Dong-Hyun Kim & Jung-Hye Choi
Article: 2319844
Published online: 25 Feb 2024
AbstractforRegulation of colonic neuropeptide Y expression by the gut microbiome in patients with ulcerative colitis and its association with anxiety- and depression-like behavior in mice | Full Text | References | PDF (3.3 MB) | EPUB | Supplemental
  • 5002 Views
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Article
B. longum CKD1 enhances the efficacy of anti-diabetic medicines through upregulation of IL- 22 response in type 2 diabetic mice
Won Jun Kim, Bum Ju Kil, Chaewon Lee, Tae Young Kim, Goeun Han, Yukyung Choi, Kyunghwan Kim, Chang Hun Shin, Seung-Young Park, Heebal Kim, Myunghoo Kim & Chul Sung Huh
Article: 2319889
Published online: 23 Feb 2024
AbstractforB. longum CKD1 enhances the efficacy of anti-diabetic medicines through upregulation of IL- 22 response in type 2 diabetic mice | Full Text | References | PDF (17.7 MB) | EPUB | Supplemental
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Review

Review Article
Roles of microbiota in pancreatic cancer development and treatment
Mariana Santos Cruz, Joseph Tintelnot & Nicola Gagliani
Article: 2320280
Published online: 27 Feb 2024
AbstractforRoles of microbiota in pancreatic cancer development and treatment | Full Text | References | PDF (1.2 MB) | EPUB
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Research Paper

Article
Modulation of chronic obstructive pulmonary disease progression by antioxidant metabolites from Pediococcus pentosaceus: enhancing gut probiotics abundance and the tryptophan-melatonin pathway
Yiting Liu, Longjie Li, Jing Feng, Bing Wan, Qiang Tu, Wei Cai, Fa Jin, Guiying Tang, Lígia R. Rodrigues, Xiuwei Zhang, Jia Yin & Yunlei Zhang
Article: 2320283
Published online: 06 Mar 2024
AbstractforModulation of chronic obstructive pulmonary disease progression by antioxidant metabolites from Pediococcus pentosaceus: enhancing gut probiotics abundance and the tryptophan-melatonin pathway | Full Text | References | PDF (9.2 MB) | EPUB | Supplemental
  • 4211 Views
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Article
The colibactin-producing Escherichia coli alters the tumor microenvironment to immunosuppressive lipid overload facilitating colorectal cancer progression and chemoresistance
Nilmara de Oliveira Alves, Guillaume Dalmasso, Darja Nikitina, Amaury Vaysse, Richard Ruez, Lea Ledoux, Thierry Pedron, Emma Bergsten, Olivier Boulard, Lora Autier, Sofian Allam, Laurence Motreff, Pierre Sauvanet, Diane Letourneur, Pragya Kashyap, Johan Gagnière, Denis Pezet, Catherine Godfraind, Michel Salzet, Emmanuel Lemichez, Mathilde Bonnet, Imène Najjar, Christophe Malabat, Marc Monot, Denis Mestivier, Nicolas Barnich, Pankaj Yadav, Isabelle Fournier, Sean Kennedy, Amel Mettouchi, Richard Bonnet, Iradj Sobhani & Mathias Chamaillard
Article: 2320291
Published online: 28 Feb 2024
AbstractforThe colibactin-producing Escherichia coli alters the tumor microenvironment to immunosuppressive lipid overload facilitating colorectal cancer progression and chemoresistance | Full Text | References | PDF (3 MB) | EPUB | Supplemental
  • 5407 Views
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Article
IgA-mediated control of host-microbial interaction during weaning reaction influences gut inflammation
Wenjie Tang, Yusen Wei, Zhixiang Ni, Kangwei Hou, Xin M. Luo & Haifeng Wang
Article: 2323220
Published online: 04 Mar 2024
AbstractforIgA-mediated control of host-microbial interaction during weaning reaction influences gut inflammation | Full Text | References | PDF (6 MB) | EPUB | Supplemental
  • 2888 Views
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Article
Gut microbiota-palmitoleic acid-interleukin-5 axis orchestrates benzene-induced hematopoietic toxicity
Lei Zhang, Ziyan Liu, Wei Zhang, Jingyu Wang, Huiwen Kang, Jiaru Jing, Lin Han & Ai Gao
Article: 2323227
Published online: 04 Mar 2024
AbstractforGut microbiota-palmitoleic acid-interleukin-5 axis orchestrates benzene-induced hematopoietic toxicity | Full Text | References | PDF (8.5 MB) | EPUB | Supplemental
  • 2337 Views
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Article
Bile acid profiling as an effective biomarker for staging in pediatric inflammatory bowel disease
Wei Chen, Daosheng Wang, Xing Deng, Hong Zhang, Danfeng Dong, Tongxuan Su, Qiuya Lu, Cen Jiang, Qi Ni, Yingchao Cui, Qianli Zhao, Xuefeng Wang, Yuan Xiao & Yibing Peng
Article: 2323231
Published online: 04 Mar 2024
AbstractforBile acid profiling as an effective biomarker for staging in pediatric inflammatory bowel disease | Full Text | References | PDF (12.1 MB) | EPUB | Supplemental
  • 3178 Views
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Article
A metagenomic prospective cohort study on gut microbiome composition and clinical infection in small bowel transplantation
Archana Madhav, Rachel Bousfield, Joana Pereira-Dias, Claire Cormie, Sally Forrest, Jacqueline Keane, Leanne Kermack, Ellen Higginson, Gordon Dougan, Harry Spiers, Dunecan Massey, Lisa Sharkey, Charlotte Rutter, Jeremy Woodward, Neil Russell, Irum Amin, Andrew Butler, Kayleigh Atkinson, Tom Dymond, Josefin Bartholdson Scott, Stephen Baker & Effrossyni Gkrania-Klotsas
Article: 2323232
Published online: 04 Mar 2024
AbstractforA metagenomic prospective cohort study on gut microbiome composition and clinical infection in small bowel transplantation | Full Text | References | PDF (4.1 MB) | EPUB | Supplemental
  • 2501 Views
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Article
BaiJ and BaiB are key enzymes in the chenodeoxycholic acid 7α-dehydroxylation pathway in the gut microbe Clostridium scindens ATCC 35704
Karin Lederballe Meibom, Solenne Marion, Colin Volet, Théo Nass, Eduard Vico-Oton, Laure Menin & Rizlan Bernier-Latmani
Article: 2323233
Published online: 11 Mar 2024
AbstractforBaiJ and BaiB are key enzymes in the chenodeoxycholic acid 7α-dehydroxylation pathway in the gut microbe Clostridium scindens ATCC 35704 | Full Text | References | PDF (3.8 MB) | EPUB | Supplemental
  • 2181 Views
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Article
Maternal smoking during pregnancy increases the risk of gut microbiome-associated childhood overweight and obesity
Ye Peng, Hein M Tun, Siew C Ng, Hogan Kok-Fung Wai, Xi Zhang, Jaclyn Parks, Catherine J Field, Piush Mandhane, Theo J Moraes, Elinor Simons, Stuart E Turvey, Padmaja Subbarao, Jeffrey R Brook, Tim K Takaro, James A Scott, Francis KL Chan & Anita L Kozyrskyj
Article: 2323234
Published online: 04 Mar 2024
AbstractforMaternal smoking during pregnancy increases the risk of gut microbiome-associated childhood overweight and obesity | Full Text | References | PDF (3 MB) | EPUB | Supplemental
  • 4499 Views
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Article
A metatranscriptomics strategy for efficient characterization of the microbiome in human tissues with low microbial biomass
Joana Pereira-Marques, Rui M. Ferreira & Ceu Figueiredo
Article: 2323235
Published online: 29 Feb 2024
AbstractforA metatranscriptomics strategy for efficient characterization of the microbiome in human tissues with low microbial biomass | Full Text | References | PDF (5.3 MB) | EPUB | Supplemental
  • 4697 Views
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Article
Multi-omics reveals deoxycholic acid modulates bile acid metabolism via the gut microbiota to antagonize carbon tetrachloride-induced chronic liver injury
Li Zhang, Zhiyi Zheng, Huanhuan Huang, Ya Fu, Tianbin Chen, Can Liu, Qiang Yi, Caorui Lin, Yongjun Zeng, Qishui Ou & Yongbin Zeng
Article: 2323236
Published online: 28 Feb 2024
AbstractforMulti-omics reveals deoxycholic acid modulates bile acid metabolism via the gut microbiota to antagonize carbon tetrachloride-induced chronic liver injury | Full Text | References | PDF (19.8 MB) | EPUB | Supplemental
  • 3900 Views
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Review

Review Article
Advancing lifelong precision medicine for cardiovascular diseases through gut microbiota modulation
Bozhong Shi, Haoyu Li & Xiaomin He
Article: 2323237
Published online: 27 Feb 2024
AbstractforAdvancing lifelong precision medicine for cardiovascular diseases through gut microbiota modulation | Full Text | References | PDF (1.7 MB) | EPUB
  • 4000 Views
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Research Paper

Article
A modified Mediterranean-style diet enhances brain function via specific gut-microbiome-brain mechanisms
Gwoncheol Park, Saurabh Kadyan, Nathaniel Hochuli, Julie Pollak, Bo Wang, Gloria Salazar, Paramita Chakrabarty, Philip Efron, Julia Sheffler & Ravinder Nagpal
Article: 2323752
Published online: 06 Mar 2024
AbstractforA modified Mediterranean-style diet enhances brain function via specific gut-microbiome-brain mechanisms | Full Text | References | PDF (20 MB) | EPUB | Supplemental
  • 7064 Views
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Article
Shotgun metagenomics and systemic targeted metabolomics highlight indole-3-propionic acid as a protective gut microbial metabolite against influenza infection
Séverine Heumel, Vinícius de Rezende Rodovalho, Charlotte Urien, Florian Specque, Patrícia Brito Rodrigues, Cyril Robil, Lou Delval, Valentin Sencio, Amandine Descat, Lucie Deruyter, Stéphanie Ferreira, Marina Gomes Machado, Adeline Barthelemy, Fabiola Silva Angulo, Joel. T Haas, Jean François Goosens, Isabelle Wolowczuk, Corinne Grangette, Yves Rouillé, Ghjuvan Grimaud, Marie Lenski, Benjamin Hennart, Marco Aurélio Ramirez Vinolo & François Trottein
Article: 2325067
Published online: 06 Mar 2024
AbstractforShotgun metagenomics and systemic targeted metabolomics highlight indole-3-propionic acid as a protective gut microbial metabolite against influenza infection | Full Text | References | PDF (5.8 MB) | EPUB | Supplemental
  • 6525 Views
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Article
mNFE: microbiome network flow entropy for detecting pre-disease states of type 1 diabetes
Rong Gao, Peiluan Li, Yueqiong Ni, Xueqing Peng, Jing Ren & Luonan Chen
Article: 2327349
Published online: 21 Mar 2024
AbstractformNFE: microbiome network flow entropy for detecting pre-disease states of type 1 diabetes | Full Text | References | PDF (9.8 MB) | EPUB | Supplemental
  • 2205 Views
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Article
ZntA maintains zinc and cadmium homeostasis and promotes oxidative stress resistance and virulence in Vibrio parahaemolyticus
Chengkun Zheng, Yimeng Zhai, Jun Qiu, Mengxian Wang, Zhengzhong Xu, Xiang Chen, Xiaohui Zhou & Xinan Jiao
Article: 2327377
Published online: 11 Mar 2024
AbstractforZntA maintains zinc and cadmium homeostasis and promotes oxidative stress resistance and virulence in Vibrio parahaemolyticus | Full Text | References | PDF (3.2 MB) | EPUB | Supplemental
  • 3362 Views
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Review

Review Article
Stress in the microbiome-immune crosstalk
Eléonore Beurel
Article: 2327409
Published online: 15 Mar 2024
AbstractforStress in the microbiome-immune crosstalk | Full Text | References | PDF (3.2 MB) | EPUB
  • 4460 Views
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Research Paper

Article
Long- and short-term effects of fecal microbiota transplantation on antibiotic resistance genes: results from a randomized placebo-controlled trial
Armin Rashidi, Maryam Ebadi, Tauseef Ur Rehman, Heba Elhusseini, David Kazadi, Hossam Halaweish, Mohammad H. Khan, Andrea Hoeschen, Qing Cao, Xianghua Luo, Amanda J. Kabage, Sharon Lopez, Shernan G. Holtan, Daniel J. Weisdorf, Chang Liu, Satoshi Ishii, Alexander Khoruts & Christopher Staley
Article: 2327442
Published online: 13 Mar 2024
AbstractforLong- and short-term effects of fecal microbiota transplantation on antibiotic resistance genes: results from a randomized placebo-controlled trial | Full Text | References | PDF (2.9 MB) | EPUB | Supplemental
  • 3291 Views
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Review

Review Article
Unveiling the hidden players: exploring the role of gut mycobiome in cancer development and treatment dynamics
Lingxi Li, Xiaowen Huang & Haoyan Chen
Article: 2328868
Published online: 14 Mar 2024
AbstractforUnveiling the hidden players: exploring the role of gut mycobiome in cancer development and treatment dynamics | Full Text | References | PDF (1,020.7 KB) | EPUB
  • 2750 Views
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Research Paper

Article
Indole-3-acetic acid alleviates DSS-induced colitis by promoting the production of R-equol from Bifidobacterium pseudolongum
Miaomiao Li, Xue Han, Lijun Sun, Xinjuan Liu, Weizhen Zhang & Jianyu Hao
Article: 2329147
Published online: 25 Mar 2024
AbstractforIndole-3-acetic acid alleviates DSS-induced colitis by promoting the production of R-equol from Bifidobacterium pseudolongum | Full Text | References | PDF (5.8 MB) | EPUB | Supplemental
  • 7696 Views
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Correction

Correction
Correction
Article: 2329383
Published online: 14 Mar 2024
CitationforCorrection | Full Text | PDF (422.3 KB) | EPUB
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Research Paper

Article
Integrated analysis of gut metabolome, microbiome, and brain function reveal the role of gut-brain axis in longevity
Bin Jiao, Ziyu Ouyang, Qianqian Liu, Tianyan Xu, Meidan Wan, Guangrong Ma, Lu Zhou, Jifeng Guo, Junling Wang, Beisha Tang, Zhixiang Zhao & Lu Shen
Article: 2331434
Published online: 28 Mar 2024
AbstractforIntegrated analysis of gut metabolome, microbiome, and brain function reveal the role of gut-brain axis in longevity | Full Text | References | PDF (19.5 MB) | EPUB | Supplemental
  • 5416 Views
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Article
CobB-mediated deacetylation of the chaperone CesA regulates Escherichia coli O157:H7 virulence
Linxing Li, Bin Yang, Jing Wang, Yi Wei, Binbin Xiang, Yutao Liu, Pan Wu, Wanwu Li, Yanling Wang, Xinyu Zhao, Jingliang Qin, Miaomiao Liu, Ruiying Liu, Guozhen Ma, Tian Fu, Min Wang & Bin Liu
Article: 2331435
Published online: 19 Mar 2024
AbstractforCobB-mediated deacetylation of the chaperone CesA regulates Escherichia coli O157:H7 virulence | Full Text | References | PDF (3.1 MB) | EPUB | Supplemental
  • 2545 Views
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Review

Review Article
Breaking the barriers: the role of gut homeostasis in Metabolic-Associated Steatotic Liver Disease (MASLD)
Raquel Benedé-Ubieto, Francisco Javier Cubero & Yulia A. Nevzorova
Article: 2331460
Published online: 21 Mar 2024
AbstractforBreaking the barriers: the role of gut homeostasis in Metabolic-Associated Steatotic Liver Disease (MASLD) | Full Text | References | PDF (5.1 MB) | EPUB | Supplemental
  • 9536 Views
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Research Paper

Article
Using a human colonoid-derived monolayer to study bacteriophage translocation
Huu Thanh Le, Alicia Fajardo Lubian, Bethany Bowring, David van der Poorten, Jonathan Iredell, Jacob George, Carola Venturini, Golo Ahlenstiel & Scott Read
Article: 2331520
Published online: 22 Mar 2024
AbstractforUsing a human colonoid-derived monolayer to study bacteriophage translocation | Full Text | References | PDF (3 MB) | EPUB | Supplemental
  • 1992 Views
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Brief Report

Brief Report
Gastrointestinal signals in supplemented media reveal a role in adherence for the Shigella flexneri sap autotransporter gene
Yrvin León, Raphael Honigsberg, David A. Rasko & Christina S. Faherty
Article: 2331985
Published online: 28 Mar 2024
AbstractforGastrointestinal signals in supplemented media reveal a role in adherence for the Shigella flexneri sap autotransporter gene | Full Text | References | PDF (698.1 KB) | EPUB
  • 1530 Views
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Research Paper

Article
Pathogen-specific alterations in intestinal microbiota precede urinary tract infections in preterm infants: a longitudinal case-control study
Luyang Hong, Yihuang Huang, Junyan Han, Shujuan Li, Lan Zhang, Qi Zhou, Xincheng Cao, Weiyin Yu, Xinhui Guo, Yi Yang, Yufeng Zhou, Weili Yan, Shangyu Hong, Siyuan Jiang & Yun Cao
Article: 2333413
Published online: 01 Apr 2024
AbstractforPathogen-specific alterations in intestinal microbiota precede urinary tract infections in preterm infants: a longitudinal case-control study | Full Text | References | PDF (3.9 MB) | EPUB | Supplemental
  • 2322 Views
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Commentary and Views

Comment
From animal models to gut-on-chip: the challenging journey to capture inter-individual variability in chronic digestive disorders
Aicha Kriaa, Vincent Mariaule, Charlotte De Rudder, Amin Jablaoui, Harry Sokol, Paul Wilmes, Emmanuelle Maguin & Moez Rhimi
Article: 2333434
Published online: 27 Mar 2024
AbstractforFrom animal models to gut-on-chip: the challenging journey to capture inter-individual variability in chronic digestive disorders | Full Text | References | PDF (601.8 KB) | EPUB
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Research Paper

Article
Oral pathobiont Klebsiella chaperon usher pili provide site-specific adaptation for the inflamed gut mucosa
Yijie Guo, Sho Kitamoto, Gustavo Caballero-Flores, Yeji Kim, Daisuke Watanabe, Kohei Sugihara, Gabriel Núñez, Christopher J. Alteri, Naohiro Inohara & Nobuhiko Kamada
Article: 2333463
Published online: 28 Mar 2024
AbstractforOral pathobiont Klebsiella chaperon usher pili provide site-specific adaptation for the inflamed gut mucosa | Full Text | References | PDF (2.3 MB) | EPUB | Supplemental
  • 2557 Views
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Article
Transplant of microbiota from Crohn’s disease patients to germ-free mice results in colitis
Irshad Ali Sheikh, Jared Bianchi-Smak, Daniel Laubitz, Gabriele Schiro, Monica T. Midura-Kiela, David G. Besselsen, Gayatri Vedantam, Sara Jarmakiewicz, Rafał Filip, Fayez K. Ghishan, Nan Gao & Pawel R. Kiela
Article: 2333483
Published online: 27 Mar 2024
AbstractforTransplant of microbiota from Crohn’s disease patients to germ-free mice results in colitis | Full Text | References | PDF (12.6 MB) | EPUB | Supplemental
  • 5085 Views
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Article
The effects of antibiotic exposures on the gut resistome during hematopoietic cell transplantation in children
Sarah M. Heston, Rebecca R. Young, Kirsten Jenkins, Paul L. Martin, Andre Stokhuyzen, Doyle V. Ward, Shakti K. Bhattarai, Vanni Bucci, Mehreen Arshad, Nelson J. Chao, Patrick C. Seed & Matthew S. Kelly
Article: 2333748
Published online: 30 Mar 2024
AbstractforThe effects of antibiotic exposures on the gut resistome during hematopoietic cell transplantation in children | Full Text | References | PDF (5.1 MB) | EPUB | Supplemental
  • 2402 Views
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Article
Fusobacterium nucleatum induces chemoresistance in colorectal cancer by inhibiting pyroptosis via the Hippo pathway
Ni Wang, Lu Zhang, Xiao-Xu Leng, Yi-Le Xie, Zi-Ran Kang, Li-Cong Zhao, Lin-Hong Song, Cheng-Bei Zhou & Jing-Yuan Fang
Article: 2333790
Published online: 27 Mar 2024
AbstractforFusobacterium nucleatum induces chemoresistance in colorectal cancer by inhibiting pyroptosis via the Hippo pathway | Full Text | References | PDF (7.5 MB) | EPUB | Supplemental
  • 5157 Views
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Article
Intestinal microbiota modulates neuroinflammatory response and brain injury after neonatal hypoxia-ischemia
Alexander Drobyshevsky, Sylvia Synowiec, Ivan Goussakov, Rafael Fabres, Jing Lu & Michael Caplan
Article: 2333808
Published online: 27 Mar 2024
AbstractforIntestinal microbiota modulates neuroinflammatory response and brain injury after neonatal hypoxia-ischemia | Full Text | References | PDF (4.3 MB) | EPUB | Supplemental
  • 2582 Views
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Article
Sialic acid-based probiotic intervention in lactating mothers improves the neonatal gut microbiota and immune responses by regulating sialylated milk oligosaccharide synthesis via the gut–breast axis
Yushuang Wang, Binqi Rui, Xiaolei Ze, Yujia Liu, Da Yu, Yinhui Liu, Zhi Li, Yu Xi, Xixi Ning, Zengjie Lei, Jieli Yuan, Liang Li, Xuguang Zhang, Wenzhe Li, Yanjie Deng, Jingyu Yan & Ming Li
Article: 2334967
Published online: 17 Apr 2024
AbstractforSialic acid-based probiotic intervention in lactating mothers improves the neonatal gut microbiota and immune responses by regulating sialylated milk oligosaccharide synthesis via the gut–breast axis | Full Text | References | PDF (19.3 MB) | EPUB | Supplemental
  • 4036 Views
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Article
Gastrointestinal microbiota and metabolites possibly contribute to distinct pathogenicity of SARS-CoV-2 proto or its variants in rhesus monkeys
Hongyu Chen, Junbin Wang, Kaiyun Ding, Jingwen Xu, Yun Yang, Cong Tang, Yanan Zhou, Wenhai Yu, Haixuan Wang, Qing Huang, Bai Li, Dexuan Kuang, Daoju Wu, Zhiwu Luo, Jiahong Gao, Yuan Zhao, Jiansheng Liu, Xiaozhong Peng, Shuaiyao Lu & Hongqi Liu
Article: 2334970
Published online: 02 Apr 2024
AbstractforGastrointestinal microbiota and metabolites possibly contribute to distinct pathogenicity of SARS-CoV-2 proto or its variants in rhesus monkeys | Full Text | References | PDF (3.3 MB) | EPUB | Supplemental
  • 2077 Views
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Article
Human gut microbiota and their production of endocannabinoid-like mediators are directly affected by a dietary oil
Charlène Roussel, Mathilde Sola, Jacob Lessard-Lord, Nayudu Nallabelli, Pamela Généreux, Camille Cavestri, Oumaima Azeggouar Wallen, Rosaria Villano, Frédéric Raymond, Nicolas Flamand, Cristoforo Silvestri & Vincenzo Di Marzo
Article: 2335879
Published online: 02 May 2024
AbstractforHuman gut microbiota and their production of endocannabinoid-like mediators are directly affected by a dietary oil | Full Text | References | PDF (5.1 MB) | EPUB | Supplemental
  • 2870 Views
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Article
Integrative analysis with microbial modelling and machine learning uncovers potential alleviators for ulcerative colitis
Jinlin Zhu, Jialin Yin, Jing Chen, Mingyi Hu, Wenwei Lu, Hongchao Wang, Hao Zhang & Wei Chen
Article: 2336877
Published online: 02 Apr 2024
AbstractforIntegrative analysis with microbial modelling and machine learning uncovers potential alleviators for ulcerative colitis | Full Text | References | PDF (6.7 MB) | EPUB | Supplemental
  • 3515 Views
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Article
Cognitive behavioral and mindfulness with daily exercise intervention is associated with changes in intestinal microbial taxa and systemic inflammation in patients with Crohn’s disease
Karny Ilan, Yair Motro, Anna Nemirovsky, Doron Schwartz, Ganit Goren, Ruslan Sergienko, Dan Greenberg, Vered Slonim-Nevo, Orly Sarid, Michael Friger, Shirley Regev, Shmuel Odes, Jacob Moran-Gilad, Alon Monsonego &  on behalf of the Israeli IBD Research Nucleus (IIRN)
Article: 2337269
Published online: 09 Apr 2024
AbstractforCognitive behavioral and mindfulness with daily exercise intervention is associated with changes in intestinal microbial taxa and systemic inflammation in patients with Crohn’s disease | Full Text | References | PDF (2.3 MB) | EPUB | Supplemental
  • 2885 Views
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Review

Review Article
New treatment approaches for Clostridioides difficile infections: alternatives to antibiotics and fecal microbiota transplantation
Tomaž Bratkovič, Abida Zahirović, Maruša Bizjak, Maja Rupnik, Borut Štrukelj & Aleš Berlec
Article: 2337312
Published online: 09 Apr 2024
AbstractforNew treatment approaches for Clostridioides difficile infections: alternatives to antibiotics and fecal microbiota transplantation | Full Text | References | PDF (3.4 MB) | EPUB
  • 4731 Views
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Brief Report

Brief Report
A high fiber diet or supplementation with Lactococcus lactis subspecies cremoris to pregnant mice confers protection against intestinal injury in adult offspring
Maria E. Barbian, Joshua A. Owens, Crystal R. Naudin, Patricia Denning, Ravi M. Patel & Rheinallt M. Jones
Article: 2337317
Published online: 15 Apr 2024
AbstractforA high fiber diet or supplementation with Lactococcus lactis subspecies cremoris to pregnant mice confers protection against intestinal injury in adult offspring | Full Text | References | PDF (2.8 MB) | EPUB
  • 1976 Views
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Research Paper

Article
Multi-strain probiotics during pregnancy in women with obesity influence infant gut microbiome development: results from a randomized, double-blind placebo-controlled study
Sofie Ingdam Halkjær, Malene Refslund Danielsen, Victoria E. de Knegt, Lee O’Brien Andersen, Christen Rune Stensvold, Henrik Vedel Nielsen, Hengameh Chloé Mirsepasi-Lauridsen, Karen Angeliki Krogfelt, Dina Cortes & Andreas Munk Petersen
Article: 2337968
Published online: 09 Apr 2024
AbstractforMulti-strain probiotics during pregnancy in women with obesity influence infant gut microbiome development: results from a randomized, double-blind placebo-controlled study | Full Text | References | PDF (6.9 MB) | EPUB | Supplemental
  • 4136 Views
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Article
A randomized double-blind, placebo-controlled trial to evaluate the safety and efficacy of live Bifidobacterium longum CECT 7347 (ES1) and heat-treated Bifidobacterium longum CECT 7347 (HT-ES1) in participants with diarrhea-predominant irritable bowel syndrome
S Srivastava, U Basak, M Naghibi, V Vijayakumar, R Parihar, J Patel, PS Jadon, A Pandit, RR Dargad, S Khanna, S Kumar & R Day
Article: 2338322
Published online: 17 Apr 2024
AbstractforA randomized double-blind, placebo-controlled trial to evaluate the safety and efficacy of live Bifidobacterium longum CECT 7347 (ES1) and heat-treated Bifidobacterium longum CECT 7347 (HT-ES1) in participants with diarrhea-predominant irritable bowel syndrome | Full Text | References | PDF (2.3 MB) | EPUB | Supplemental
  • 6644 Views
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Brief Report

Brief Report
Prebiotic utilisation provides Lactiplantibacillus plantarum a competitive advantage in vitro, but is not reflected by an increased intestinal fitness
Jori Fuhren, Markus Schwalbe, Jos Boekhorst, Christiane Rösch, Henk A. Schols & Michiel Kleerebezem
Article: 2338946
Published online: 24 Apr 2024
AbstractforPrebiotic utilisation provides Lactiplantibacillus plantarum a competitive advantage in vitro, but is not reflected by an increased intestinal fitness | Full Text | References | PDF (1.4 MB) | EPUB | Supplemental
  • 1945 Views
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Review

Review Article
Akkermansia muciniphila: a deworming partner independent of type 2 immunity
Jiaqi Wang, Xiufeng Zhao, Xianhe Li & Xuemin Jin
Article: 2338947
Published online: 08 May 2024
AbstractforAkkermansia muciniphila: a deworming partner independent of type 2 immunity | Full Text | References | PDF (1 MB) | EPUB
  • 1789 Views
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Research Paper

Article
Intestinal carbapenem-resistant Klebsiella pneumoniae undergoes complex transcriptional reprogramming following immune activation
Clement David, Aleksander Czauderna, Liqing Cheng, Marion Lagune, Hea-Jin Jung, Sohn G. Kim, Eric G. Pamer, Julien Prados, Liang Chen & Simone Becattini
Article: 2340486
Published online: 24 Apr 2024
AbstractforIntestinal carbapenem-resistant Klebsiella pneumoniae undergoes complex transcriptional reprogramming following immune activation | Full Text | References | PDF (7.3 MB) | EPUB | Supplemental
  • 3026 Views
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Open Access
Article
Effects of Prevotella copri on insulin, gut microbiota and bile acids
Jiatai Gong, Qianjin Zhang, Ruizhi Hu, Xizi Yang, Chengkun Fang, Liping Yao, Jing Lv, Long Wang, Mingkun Shi, Wentao Zhang, Siqi Ma, Hongkun Xiang, Hongfu Zhang, De-Xing Hou, Yulong Yin, Jianhua He, Lijun Peng & Shusong Wu
Article: 2340487
Published online: 16 Apr 2024
AbstractforEffects of Prevotella copri on insulin, gut microbiota and bile acids | Full Text | References | PDF (4.9 MB) | EPUB | Supplemental
  • 5004 Views
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Review

Review Article
Sweet, bloody consumption – what we eat and how it affects vascular ageing, the BBB and kidney health in CKD
Angelina Schwarz, Leah Hernandez, Samsul Arefin, Elisa Sartirana, Anna Witasp, Annika Wernerson, Peter Stenvinkel & Karolina Kublickiene
Article: 2341449
Published online: 30 Apr 2024
AbstractforSweet, bloody consumption – what we eat and how it affects vascular ageing, the BBB and kidney health in CKD | Full Text | References | PDF (2 MB) | EPUB
  • 3424 Views
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Research Paper

Article
Dietary fiber guar gum-induced shift in gut microbiota metabolism and intestinal immune activity enhances susceptibility to colonic inflammation
Devendra Paudel, Divek V. T. Nair, Sangshan Tian, Fuhua Hao, Umesh K. Goand, Grace Joseph, Eleni Prodes, Zhi Chai, Chloé E.M. Robert, Benoit Chassaing, Andrew D. Patterson & Vishal Singh
Article: 2341457
Published online: 17 Apr 2024
AbstractforDietary fiber guar gum-induced shift in gut microbiota metabolism and intestinal immune activity enhances susceptibility to colonic inflammation | Full Text | References | PDF (6.3 MB) | EPUB | Supplemental
  • 8719 Views
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Open Access
Article
Proton pump inhibitors increase the risk of carbapenem-resistant Enterobacteriaceae colonization by facilitating the transfer of antibiotic resistance genes among bacteria in the gut microbiome
Imchang Lee, Jae-Won Jo, Heung-Jeong Woo, Ki Tae Suk, Seung Soon Lee & Bong-Soo Kim
Article: 2341635
Published online: 18 Apr 2024
AbstractforProton pump inhibitors increase the risk of carbapenem-resistant Enterobacteriaceae colonization by facilitating the transfer of antibiotic resistance genes among bacteria in the gut microbiome | Full Text | References | PDF (7.2 MB) | EPUB | Supplemental
  • 2678 Views
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Article
Genetic and microbial determinants of azoxymethane-induced colorectal tumor susceptibility in Collaborative Cross mice and their implication in human cancer
Dan Li, Chenhan Zhong, Mengyuan Yang, Li He, Hang Chang, Ning Zhu, Susan E Celniker, David W Threadgill, Antoine M Snijders, Jian-Hua Mao & Ying Yuan
Article: 2341647
Published online: 24 Apr 2024
AbstractforGenetic and microbial determinants of azoxymethane-induced colorectal tumor susceptibility in Collaborative Cross mice and their implication in human cancer | Full Text | References | PDF (11.8 MB) | EPUB | Supplemental
  • 2006 Views
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Review

Review Article
Bacterial membrane vesicles in the pathogenesis and treatment of inflammatory bowel disease
Chinasa Valerie Olovo, Dickson Kofi Wiredu Ocansey, Ying Ji, Xinxiang Huang & Min Xu
Article: 2341670
Published online: 26 Apr 2024
AbstractforBacterial membrane vesicles in the pathogenesis and treatment of inflammatory bowel disease | Full Text | References | PDF (9.8 MB) | EPUB
  • 3927 Views
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Review Article
An emerging strategy: probiotics enhance the effectiveness of tumor immunotherapy via mediating the gut microbiome
Shuaiming Jiang, Wenyao Ma, Chenchen Ma, Zeng Zhang, Wanli Zhang & Jiachao Zhang
Article: 2341717
Published online: 08 May 2024
AbstractforAn emerging strategy: probiotics enhance the effectiveness of tumor immunotherapy via mediating the gut microbiome | Full Text | References | PDF (4.2 MB) | EPUB
  • 3572 Views
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Research Paper

Article
The gut microbe pair of Oribacterium sp. GMB0313 and Ruminococcus sp. GMB0270 confers complete protection against SARS-CoV-2 infection by activating CD8+ T cell-mediated immunity
Mingda Wang, Enkhchimeg Lkhagva, Sura Kim, Chongkai Zhai, Md Minarul Islam, Hyeon J. Kim & Seong-Tshool Hong
Article: 2342497
Published online: 18 Apr 2024
AbstractforThe gut microbe pair of Oribacterium sp. GMB0313 and Ruminococcus sp. GMB0270 confers complete protection against SARS-CoV-2 infection by activating CD8+ T cell-mediated immunity | Full Text | References | PDF (7 MB) | EPUB | Supplemental
  • 2633 Views
  • 4 CrossRef citations
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Article
Comparison of fidaxomicin, thuricin CD, vancomycin and nisin highlights the narrow spectrum nature of thuricin CD
L. Walsh, A. Lavelle, PM O’Connor, C. Hill & R. P. Ross
Article: 2342583
Published online: 09 May 2024
AbstractforComparison of fidaxomicin, thuricin CD, vancomycin and nisin highlights the narrow spectrum nature of thuricin CD | Full Text | References | PDF (3.7 MB) | EPUB
  • 1815 Views
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Article
Recipient microbiome-related features predicting metabolic improvement following fecal microbiota transplantation in adults with severe obesity and metabolic syndrome: a secondary analysis of a phase 2 clinical trial
Zhengxiao Zhang, Valentin Mocanu, Edward C. Deehan, Naomi Hotte, Yuanyuan Zhu, Shanshan Wei, Dina H. Kao, Shahzeer Karmali, Daniel W. Birch, Jens Walter & Karen L. Madsen
Article: 2345134
Published online: 29 Apr 2024
AbstractforRecipient microbiome-related features predicting metabolic improvement following fecal microbiota transplantation in adults with severe obesity and metabolic syndrome: a secondary analysis of a phase 2 clinical trial | Full Text | References | PDF (1.3 MB) | EPUB | Supplemental
  • 4371 Views
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Article
Efficacy of an inulin-based treatment on intestinal colonization by multidrug-resistant E. coli: insight into the mechanism of action
Murad Ishnaiwer, Quentin Le Bastard, Maxime Naour, Michal Zeman, Eric Dailly, Emmanuel Montassier, Eric Batard & Michel Dion
Article: 2347021
Published online: 29 Apr 2024
AbstractforEfficacy of an inulin-based treatment on intestinal colonization by multidrug-resistant E. coli: insight into the mechanism of action | Full Text | References | PDF (3 MB) | EPUB | Supplemental
  • 2282 Views
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Article
M2 macrophages participate in ILC2 activation induced by Helicobacter pylori infection
Ruyi Peng, Canxia Xu, Linfang Zhang, Xiaoming Liu, Dongzi Peng, Xingcen Chen, Deliang Liu & Rong Li
Article: 2347025
Published online: 01 May 2024
AbstractforM2 macrophages participate in ILC2 activation induced by Helicobacter pylori infection | Full Text | References | PDF (4.2 MB) | EPUB | Supplemental
  • 2062 Views
  • 5 CrossRef citations
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Article
Metabolome-associated psychological comorbidities improvement in irritable bowel syndrome patients receiving a probiotic
Francois-Pierre Martin, Ornella Cominetti, Bernard Berger, Séverine Combremont, Julien Marquis, Guoxiang Xie, Wei Jia, Maria Inés Pinto-Sanchez, Premysl Bercik & Gabriela Bergonzelli
Article: 2347715
Published online: 08 May 2024
AbstractforMetabolome-associated psychological comorbidities improvement in irritable bowel syndrome patients receiving a probiotic | Full Text | References | PDF (2.2 MB) | EPUB | Supplemental
  • 6283 Views
  • 7 CrossRef citations
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Open Access
Article
Microbiota-derived I3A protects the intestine against radiation injury by activating AhR/IL-10/Wnt signaling and enhancing the abundance of probiotics
Li-Wei Xie, Shang Cai, Hai-Yan Lu, Feng-Ling Tang, Rui-Qiu Zhu, Ye Tian & Ming Li
Article: 2347722
Published online: 05 May 2024
AbstractforMicrobiota-derived I3A protects the intestine against radiation injury by activating AhR/IL-10/Wnt signaling and enhancing the abundance of probiotics | Full Text | References | PDF (9.5 MB) | EPUB | Supplemental
  • 5949 Views
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Open Access
Article
Christensenella strain resources, genomic/metabolomic profiling, and association with host at species level
Xin-Wei Sun, Hao-Jie Huang, Xiao-Meng Wang, Rui-Qi Wei, Han-Yu Niu, Hao-Yu Chen, Man Luo, Rashidin Abdugheni, Yu-Lin Wang, Feng-Lan Liu, He Jiang, Chang Liu & Shuang-Jiang Liu
Article: 2347725
Published online: 09 May 2024
AbstractforChristensenella strain resources, genomic/metabolomic profiling, and association with host at species level | Full Text | References | PDF (7.2 MB) | EPUB | Supplemental
  • 3545 Views
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Open Access

Brief Report

Brief Report
Human gut-associated Bifidobacterium species salvage exogenous indole, a uremic toxin precursor, to synthesize indole-3-lactic acid via tryptophan
Cheng Chung Yong, Takuma Sakurai, Hiroki Kaneko, Ayako Horigome, Eri Mitsuyama, Aruto Nakajima, Toshihiko Katoh, Mikiyasu Sakanaka, Takaaki Abe, Jin-Zhong Xiao, Miyuki Tanaka, Toshitaka Odamaki & Takane Katayama
Article: 2347728
Published online: 05 May 2024
AbstractforHuman gut-associated Bifidobacterium species salvage exogenous indole, a uremic toxin precursor, to synthesize indole-3-lactic acid via tryptophan | Full Text | References | PDF (772.2 KB) | EPUB | Supplemental
  • 5031 Views
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Open Access

Research Paper

Article
Prevotella copri exhausts intrinsic indole-3-pyruvic acid in the host to promote breast cancer progression: inactivation of AMPK via UHRF1-mediated negative regulation
Jiyan Su, Xiaojie Lin, Dan Li, Chunmin Yang, Shumei Lv, Xiaohong Chen, Xiujuan Yang, Botao Pan, Rui Xu, Liping Ren, Yanfang Zhang, Yizhen Xie, Qianjun Chen & Chenglai Xia
Article: 2347757
Published online: 21 May 2024
AbstractforPrevotella copri exhausts intrinsic indole-3-pyruvic acid in the host to promote breast cancer progression: inactivation of AMPK via UHRF1-mediated negative regulation | Full Text | References | PDF (9 MB) | EPUB | Supplemental
  • 3504 Views
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Article
Commensal microbiota-derived metabolite agmatine triggers inflammation to promote colorectal tumorigenesis
Yu Lu, Aoxi Cui & Xiaobo Zhang
Article: 2348441
Published online: 05 May 2024
AbstractforCommensal microbiota-derived metabolite agmatine triggers inflammation to promote colorectal tumorigenesis | Full Text | References | PDF (4.6 MB) | EPUB | Supplemental
  • 3914 Views
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Article
Spatial transcriptomic analysis reveals local effects of intratumoral fusobacterial infection on DNA damage and immune signaling in rectal cancer
William P. Duggan, Batuhan Kisakol, Ina Woods, Mohammedreza Azimi, Heiko Dussmann, Joanna Fay, Tony O’Grady, Barry Maguire, Ian S. Reynolds, Manuela Salvucci, Daniel J. Slade, Deborah A. McNamara, John P. Burke & Jochen H.M. Prehn
Article: 2350149
Published online: 06 May 2024
AbstractforSpatial transcriptomic analysis reveals local effects of intratumoral fusobacterial infection on DNA damage and immune signaling in rectal cancer | Full Text | References | PDF (8.1 MB) | EPUB | Supplemental
  • 2980 Views
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Article
Antigenic operon fragmentation and diversification mechanism in Bacteroidota impacts gut metagenomics and pathobionts in Crohn's disease microlesions
Nicholas C. Bank, Vaidhvi Singh, Blake McCourt, Aaron Burberry, Kyle D. Roberts, Brandon Grubb & Alex Rodriguez-Palacios
Article: 2350150
Published online: 06 Jun 2024
AbstractforAntigenic operon fragmentation and diversification mechanism in Bacteroidota impacts gut metagenomics and pathobionts in Crohn's disease microlesions | Full Text | References | PDF (6.2 MB) | EPUB | Supplemental
  • 1938 Views
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Article
Meta-analysis identifying gut microbial biomarkers of Qinghai-Tibet Plateau populations and the functionality of microbiota-derived butyrate in high-altitude adaptation
Hongwen Zhao, Longjie Sun, Jiali Liu, Bin Shi, Yaopeng Zhang, Ci-Ren Qu-Zong, Tsechoe Dorji, Tieyu Wang, Hongli Yuan & Jinshui Yang
Article: 2350151
Published online: 07 May 2024
AbstractforMeta-analysis identifying gut microbial biomarkers of Qinghai-Tibet Plateau populations and the functionality of microbiota-derived butyrate in high-altitude adaptation | Full Text | References | PDF (13.4 MB) | EPUB | Supplemental
  • 3456 Views
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Open Access
Article
Biofilms and core pathogens shape the tumor microenvironment and immune phenotype in colorectal cancer
Lasse Kvich, Blaine Gabriel Fritz, Henrike Zschach, Thilde Terkelsen, Hans Raskov, Kathrine Høst-Rasmussen, Morten Ragn Jakobsen, Alexandra Gabriella Gheorghe, Ismail Gögenur & Thomas Bjarnsholt
Article: 2350156
Published online: 10 May 2024
AbstractforBiofilms and core pathogens shape the tumor microenvironment and immune phenotype in colorectal cancer | Full Text | References | PDF (5.4 MB) | EPUB | Supplemental
  • 3073 Views
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Article
Spatio-temporal dynamics of the human small intestinal microbiome and its response to a synbiotic
Ran An, Ellen Wilms, Jacoline Gerritsen, Hye Kyong Kim, Celia Seguí Pérez, Isolde Besseling-van der Vaart, Daisy M.A.E. Jonkers, Ger T. Rijkers, Willem M. de Vos, Ad A.M. Masclee, Erwin G. Zoetendal, Freddy J. Troost & Hauke Smidt
Article: 2350173
Published online: 13 May 2024
AbstractforSpatio-temporal dynamics of the human small intestinal microbiome and its response to a synbiotic | Full Text | References | PDF (1.4 MB) | EPUB | Supplemental
  • 3036 Views
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Article
Ethanolamine enhances adhesion, promotes microcompartment formation, and modulates gene expression in Levilactobacillus brevis ATCC 14869
Polycronis P. Akouris, Gerrit A. Stuivenberg, John A. Chmiel, Wongsakorn Kiattiburut, Annabel Poon, Gregor Reid & Jeremy P. Burton
Article: 2350778
Published online: 08 May 2024
AbstractforEthanolamine enhances adhesion, promotes microcompartment formation, and modulates gene expression in Levilactobacillus brevis ATCC 14869 | Full Text | References | PDF (4.9 MB) | EPUB
  • 1624 Views
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Review

Review Article
Ecological insights into hematopoiesis regulation: unraveling the influence of gut microbiota
Kaiwen Zheng, Zhifeng Wei & Wei Li
Article: 2350784
Published online: 10 May 2024
AbstractforEcological insights into hematopoiesis regulation: unraveling the influence of gut microbiota | Full Text | References | PDF (1.5 MB) | EPUB
  • 1928 Views
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Review Article
Diet-microbiota associations in gastrointestinal research: a systematic review
Kerith Duncanson, Georgina Williams, Emily C. Hoedt, Clare E. Collins, Simon Keely & Nicholas J. Talley
Article: 2350785
Published online: 09 May 2024
AbstractforDiet-microbiota associations in gastrointestinal research: a systematic review | Full Text | References | PDF (999.4 KB) | EPUB | Supplemental
  • 6118 Views
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Review Article
Pathogenesis and therapeutic opportunities of gut microbiome dysbiosis in critical illness
Nicole A Cho, Kathryn Strayer, Breenna Dobson & Braedon McDonald
Article: 2351478
Published online: 23 May 2024
AbstractforPathogenesis and therapeutic opportunities of gut microbiome dysbiosis in critical illness | Full Text | References | PDF (1.3 MB) | EPUB
  • 3376 Views
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Review Article
Microbiota transplantation in restoring cesarean-related infant dysbiosis: a new frontier
Sina Liu, Xiaoxia Luo, Lepeng Zhou, Ri-hua Xie & Yan He
Article: 2351503
Published online: 15 May 2024
AbstractforMicrobiota transplantation in restoring cesarean-related infant dysbiosis: a new frontier | Full Text | References | PDF (681.6 KB) | EPUB
  • 2567 Views
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Review Article

Review Article
New methods to unveil host-microbe interaction mechanisms along the microbiota-gut-brain-axis
Habibullah Moradian, Tristan Gabriel, Mathilde Barrau, Xavier Roblin & Stéphane Paul
Article: 2351520
Published online: 08 May 2024
AbstractforNew methods to unveil host-microbe interaction mechanisms along the microbiota-gut-brain-axis | Full Text | References | PDF (1.4 MB) | EPUB
  • 3499 Views
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Research Paper

Article
Prevotella copri promotes vascular calcification via lipopolysaccharide through activation of NF-κB signaling pathway
Qing-Yun Hao, Jing Yan, Jin-Tao Wei, Yu-Hong Zeng, Li-Yun Feng, Dong-Dong Que, Shi-Chao Li, Jing-Bin Guo, Ying Fan, Yun-Fa Ding, Xiu-Li Zhang, Ping-Zhen Yang, Jing-Wei Gao & Ze-Hua Li
Article: 2351532
Published online: 10 May 2024
AbstractforPrevotella copri promotes vascular calcification via lipopolysaccharide through activation of NF-κB signaling pathway | Full Text | References | PDF (5.2 MB) | EPUB | Supplemental
  • 4321 Views
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Article
Cultivated Enterococcus faecium B6 from children with obesity promotes nonalcoholic fatty liver disease by the bioactive metabolite tyramine
Jia Wei, Jiayou Luo, Fei Yang, Xiangling Feng, Ming Zeng, Wen Dai, Xiongfeng Pan, Yue Yang, Yamei Li, Yamei Duan, Xiang Xiao, Ping Ye, Zhenzhen Yao, Yixu Liu, Zhihang Huang, Jiajia Zhang, Yan Zhong, Ningan Xu & Miyang Luo
Article: 2351620
Published online: 13 May 2024
AbstractforCultivated Enterococcus faecium B6 from children with obesity promotes nonalcoholic fatty liver disease by the bioactive metabolite tyramine | Full Text | References | PDF (9.5 MB) | EPUB | Supplemental
  • 3264 Views
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Review Article

Review Article
The neonatal gut microbiome and global health
Pinaki Panigrahi
Article: 2352175
Published online: 14 May 2024
AbstractforThe neonatal gut microbiome and global health | Full Text | References | PDF (1.4 MB) | EPUB
  • 2933 Views
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Research Paper

Article
Two extracellular α-arabinofuranosidases are required for cereal-derived arabinoxylan metabolism by Bifidobacterium longum subsp. longum
Lisa Friess, Francesca Bottacini, Fionnuala M. McAuliffe, Ian J. O’Neill, Paul D. Cotter, Ciaran Lee, Jose Munoz-Munoz & Douwe van Sinderen
Article: 2353229
Published online: 16 May 2024
AbstractforTwo extracellular α-arabinofuranosidases are required for cereal-derived arabinoxylan metabolism by Bifidobacterium longum subsp. longum | Full Text | References | PDF (4.8 MB) | EPUB | Supplemental
  • 2094 Views
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Article
Fecal transplant from vaginally seeded infants decreases intraabdominal adiposity in mice
Sivaranjani Namasivayam, Curtis Tilves, Hua Ding, Shaoguang Wu, Jada C Domingue, Camilo Ruiz-Bedoya, Ankit Shah, Eric Bohrnsen, Benjamin Schwarz, Mickayla Bacorn, Qing Chen, Shira Levy, Maria Gloria Dominguez Bello, Sanjay K Jain, Cynthia L Sears, Noel T Mueller & Suchitra K Hourigan
Article: 2353394
Published online: 14 May 2024
AbstractforFecal transplant from vaginally seeded infants decreases intraabdominal adiposity in mice | Full Text | References | PDF (2.5 MB) | EPUB | Supplemental
  • 3156 Views
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Brief Report

Brief Report
Fecal microbiota transplantation significantly improved respiratory failure of amyotrophic lateral sclerosis
Jingshuang Yan, Huixin Chen, Yan Zhang, Lihua Peng, Zikai Wang, Xiaoyang Lan, Shengyuan Yu & Yunsheng Yang
Article: 2353396
Published online: 22 May 2024
AbstractforFecal microbiota transplantation significantly improved respiratory failure of amyotrophic lateral sclerosis | Full Text | References | PDF (1.3 MB) | EPUB | Supplemental
  • 8192 Views
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Review

Review Article
Host-microbiota interaction in intestinal stem cell homeostasis
Haiqin Wu, Chunlong Mu, Laipeng Xu, Kaifan Yu, Le Shen & Weiyun Zhu
Article: 2353399
Published online: 17 May 2024
AbstractforHost-microbiota interaction in intestinal stem cell homeostasis | Full Text | References | PDF (4.3 MB) | EPUB
  • 4581 Views
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Research Paper

Article
Dietary restriction rescues 5-fluorouracil-induced lethal intestinal toxicity in old mice by blocking translocation of opportunistic pathogens
Duozhuang Tang, Rongrong Qiu, Xingxing Qiu, Man Sun, Mingyue Su, Zhendong Tao, Liu Zhang & Si Tao
Article: 2355693
Published online: 23 May 2024
AbstractforDietary restriction rescues 5-fluorouracil-induced lethal intestinal toxicity in old mice by blocking translocation of opportunistic pathogens | Full Text | References | PDF (31.8 MB) | EPUB | Supplemental
  • 1622 Views
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Article
The transplantation of the gut microbiome of fat-1 mice protects against colonic mucus layer disruption and endoplasmic reticulum stress induced by high fat diet
Amina Bourragat, Quentin Escoula, Sandrine Bellenger, Olivier Zemb, Martin Beaumont, Killian Chaumonnot, Jean-Pierre Farine, Emmanuel Jacotot, Aline Bonnotte, Laure Avoscan, Jeanine Lherminier, Kangjia Luo, Michel Narce & Jérôme Bellenger
Article: 2356270
Published online: 26 May 2024
AbstractforThe transplantation of the gut microbiome of fat-1 mice protects against colonic mucus layer disruption and endoplasmic reticulum stress induced by high fat diet | Full Text | References | PDF (4.2 MB) | EPUB | Supplemental
  • 2261 Views
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Article
The protective role of commensal gut microbes and their metabolites against bacterial pathogens
Liqin Cheng, Mário S. P. Correia, Shawn M. Higdon, Fabricio Romero Garcia, Ioanna Tsiara, Enrique Joffré, Åsa Sjöling, Fredrik Boulund, Elisabeth Lissa Norin, Lars Engstrand, Daniel Globisch & Juan Du
Article: 2356275
Published online: 26 May 2024
AbstractforThe protective role of commensal gut microbes and their metabolites against bacterial pathogens | Full Text | References | PDF (6.6 MB) | EPUB | Supplemental
  • 3415 Views
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Article
The impact of gestational diabetes on functional capacity of the infant gut microbiome is modest and transient
Ryan V. Chieu, Katharine Hamilton, Paul M. Ryan, Julia Copeland, Pauline W. Wang, Ravi Retnakaran, David S. Guttman, John Parkinson & Jill K. Hamilton
Article: 2356277
Published online: 26 May 2024
AbstractforThe impact of gestational diabetes on functional capacity of the infant gut microbiome is modest and transient | Full Text | References | PDF (3.1 MB) | EPUB | Supplemental
  • 1862 Views
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Review

Review Article
Untapped potential of gut microbiome for hypertension management
Kan Gao, Pu Xiu Wang, Xue Mei, Tao Yang & Kai Yu
Article: 2356278
Published online: 02 Jun 2024
AbstractforUntapped potential of gut microbiome for hypertension management | Full Text | References | PDF (857.9 KB) | EPUB
  • 2744 Views
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Interview

Review Article
The use of probiotics and prebiotics in decolonizing pathogenic bacteria from the gut; a systematic review and meta-analysis of clinical outcomes
Md Nannur Rahman, Nilakshi Barua, Martha C.F. Tin, Priyanga Dharmaratne, Sunny H. Wong & Margaret Ip
Article: 2356279
Published online: 22 May 2024
AbstractforThe use of probiotics and prebiotics in decolonizing pathogenic bacteria from the gut; a systematic review and meta-analysis of clinical outcomes | Full Text | References | PDF (5.4 MB) | EPUB | Supplemental
  • 6818 Views
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Review

Review Article
Novel approaches in IBD therapy: targeting the gut microbiota-bile acid axis
Yinping Pan, Haojie Zhang, Minghui Li, Tingjing He, Sihao Guo, Liancai Zhu, Jun Tan & Bochu Wang
Article: 2356284
Published online: 20 May 2024
AbstractforNovel approaches in IBD therapy: targeting the gut microbiota-bile acid axis | Full Text | References | PDF (5.6 MB) | EPUB
  • 4924 Views
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Research Article

Article
Two-component system RstAB promotes the pathogenicity of adherent-invasive Escherichia coli in response to acidic conditions within macrophages
Ting Yao, Xingmei Liu, Dan Li, Yu Huang, Wen Yang, Ruiying Liu, Qian Wang, Xueping Li, Jiarui Zhou, Chen Jin, Yutao Liu, Bin Yang & Yu Pang
Article: 2356642
Published online: 20 May 2024
AbstractforTwo-component system RstAB promotes the pathogenicity of adherent-invasive Escherichia coli in response to acidic conditions within macrophages | Full Text | References | PDF (3.8 MB) | EPUB | Supplemental
  • 1890 Views
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Research Paper

Article
The role of Bifidobacterium genus in modulating the neonate microbiota: implications for antibiotic resistance acquisition in early life
Anna Samarra, Raúl Cabrera-Rubio, Cecilia Martínez-Costa & Maria Carmen Collado
Article: 2357176
Published online: 26 May 2024
AbstractforThe role of Bifidobacterium genus in modulating the neonate microbiota: implications for antibiotic resistance acquisition in early life | Full Text | References | PDF (2.2 MB) | EPUB | Supplemental
  • 2521 Views
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Review

Review Article
From gut microbiota to brain: implications on binge eating disorders
Weiwei Guo & Wei Xiong
Article: 2357177
Published online: 23 May 2024
AbstractforFrom gut microbiota to brain: implications on binge eating disorders | Full Text | References | PDF (1.1 MB) | EPUB
  • 4395 Views
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Research Paper

Article
Incremental increases in physiological fluid shear progressively alter pathogenic phenotypes and gene expression in multidrug resistant Salmonella
Jiseon Yang, Jennifer Barrila, Eric A. Nauman, Seth D. Nydam, Shanshan Yang, Jin Park, Ami D. Gutierrez-Jensen, Christian L. Castro, C. Mark Ott, Kristina Buss, Jason Steel, Anne D. Zakrajsek, Mary M. Schuff & Cheryl A. Nickerson
Article: 2357767
Published online: 23 May 2024
AbstractforIncremental increases in physiological fluid shear progressively alter pathogenic phenotypes and gene expression in multidrug resistant Salmonella | Full Text | References | PDF (4.4 MB) | EPUB | Supplemental
  • 1384 Views
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Article
Archaea influence composition of endoscopically visible ileocolonic biofilms
Elisabeth Orgler, Maximilian Baumgartner, Stefanie Duller, Christina Kumptisch, Bela Hausmann, Doris Moser, Vineeta Khare, Michaela Lang, Thomas Köcher, Adrian Frick, Markus Muttenthaler, Athanasios Makristathis, Christine Moissl-Eichinger & Christoph Gasche
Article: 2359500
Published online: 02 Jun 2024
AbstractforArchaea influence composition of endoscopically visible ileocolonic biofilms | Full Text | References | PDF (1.8 MB) | EPUB | Supplemental
  • 2784 Views
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Article
Enhancing social behavior in an autism spectrum disorder mouse model: investigating the underlying mechanisms of Lactiplantibacillus plantarum intervention
Chih-Ming Chen, Chien-Chen Wu, Yebeen Kim, Wei-Yu Hsu, Ying-Chieh Tsai & Shu-Ling Chiu
Article: 2359501
Published online: 06 Jun 2024
AbstractforEnhancing social behavior in an autism spectrum disorder mouse model: investigating the underlying mechanisms of Lactiplantibacillus plantarum intervention | Full Text | References | PDF (32.4 MB) | EPUB | Supplemental
  • 4234 Views
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Review

Review Article
Gut-bacteria derived membrane vesicles and host metabolic health: a narrative review
Jari Verbunt, Johan Jocken, Ellen Blaak, Paul Savelkoul & Frank Stassen
Article: 2359515
Published online: 29 May 2024
AbstractforGut-bacteria derived membrane vesicles and host metabolic health: a narrative review | Full Text | References | PDF (3.1 MB) | EPUB
  • 3528 Views
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Research Paper

Article
The Fe-S cluster biosynthesis in Enterococcus faecium is essential for anaerobic growth and gastrointestinal colonization
Linan Xu, Yajing Wu, Xiangpeng Yang, Xinxin Pang, Yansha Wu, Xingshuai Li, Xiayu Liu, Yuzhong Zhao, Lumin Yu, Peikun Wang, Bin Ye, Shijin Jiang, Junfei Ma & Xinglin Zhang
Article: 2359665
Published online: 03 Jun 2024
AbstractforThe Fe-S cluster biosynthesis in Enterococcus faecium is essential for anaerobic growth and gastrointestinal colonization | Full Text | References | PDF (9.9 MB) | EPUB | Supplemental
  • 2114 Views
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Review

Review Article
The human gut microbiome and aging
Evan Bradley & John Haran
Article: 2359677
Published online: 03 Jun 2024
AbstractforThe human gut microbiome and aging | Full Text | References | PDF (1.2 MB) | EPUB
  • 10735 Views
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Review Article
Vaccines against extraintestinal pathogenic Escherichia coli (ExPEC): progress and challenges
Ling Qiu, Dylan Chirman, Justin R. Clark, Yikun Xing, Haroldo Hernandez Santos, Ellen E. Vaughan & Anthony W. Maresso
Article: 2359691
Published online: 02 Jun 2024
AbstractforVaccines against extraintestinal pathogenic Escherichia coli (ExPEC): progress and challenges | Full Text | References | PDF (3.8 MB) | EPUB
  • 3929 Views
  • 5 CrossRef citations
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Research Paper

Article
Hydrogen peroxide in breast milk is crucial for gut microbiota formation and myelin development in neonatal mice
Jun Kambe, Kento Usuda, Ryo Inoue, Kazuhiko Hirayama, Masahiko Ito, Ken Suenaga, Sora Masukado, Hong Liu, Shiho Miyata, Chunmei Li, Ikuo Kimura, Yuki Yamamoto & Kentaro Nagaoka
Article: 2359729
Published online: 30 May 2024
AbstractforHydrogen peroxide in breast milk is crucial for gut microbiota formation and myelin development in neonatal mice | Full Text | References | PDF (5 MB) | EPUB | Supplemental
  • 3622 Views
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Review

Review Article
The gut microbiome in disorders of gut–brain interaction
Narjis Kraimi, Taylor Ross, Julien Pujo & Giada De Palma
Article: 2360233
Published online: 01 Jul 2024
AbstractforThe gut microbiome in disorders of gut–brain interaction | Full Text | References | PDF (1.1 MB) | EPUB
  • 5347 Views
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Research Paper

Article
Gut microbiota dysbiosis-related susceptibility to nontuberculous mycobacterial lung disease
Tzu-Lung Lin, Yen-Liang Kuo, Juo-Hsin Lai, Chia-Chen Lu, Chang-Tsu Yuan, Chi-Yu Hsu, Bo-Shiun Yan, Lawrence Shih-Hsin Wu, Ting-Shu Wu, Jann-Yuan Wang, Chong-Jen Yu, Hsin-Chih Lai, Jwu-Ching Shu & Chin-Chung Shu
Article: 2361490
Published online: 11 Jun 2024
AbstractforGut microbiota dysbiosis-related susceptibility to nontuberculous mycobacterial lung disease | Full Text | References | PDF (4.8 MB) | EPUB | Supplemental
  • 2275 Views
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Article
Gut microbiome encoded purine and amino acid pathways present prospective biomarkers for predicting metformin therapy efficacy in newly diagnosed T2D patients
Ilze Elbere, Zigmunds Orlovskis, Laura Ansone, Ivars Silamikelis, Lauma Jagare, Liga Birzniece, Kaspars Megnis, Kristaps Leskovskis, Annija Vaska, Maris Turks, Kristaps Klavins, Valdis Pirags, Monta Briviba & Janis Klovins
Article: 2361491
Published online: 13 Jun 2024
AbstractforGut microbiome encoded purine and amino acid pathways present prospective biomarkers for predicting metformin therapy efficacy in newly diagnosed T2D patients | Full Text | References | PDF (16.3 MB) | EPUB | Supplemental
  • 2482 Views
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Article
Disruption of intestinal oxygen balance in acute colitis alters the gut microbiome
Wenjing Zong, Elliot S. Friedman, Srinivasa Rao Allu, Jenni Firrman, Vincent Tu, Scott G. Daniel, Kyle Bittinger, LinShu Liu, Sergei A. Vinogradov & Gary D. Wu
Article: 2361493
Published online: 03 Jul 2024
AbstractforDisruption of intestinal oxygen balance in acute colitis alters the gut microbiome | Full Text | References | PDF (2.6 MB) | EPUB | Supplemental
  • 2427 Views
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Article
The microbiota and the host organism switch between cooperation and competition based on dietary iron levels
Marie-Louise Noordine, Yohannes Seyoum, Aurélia Bruneau, Kaleab Baye, Thibaud Lefebvre, Claire Cherbuy, François Canonne-Hergaux, Gaël Nicolas, Christèle Humblot & Muriel Thomas
Article: 2361660
Published online: 27 Jun 2024
AbstractforThe microbiota and the host organism switch between cooperation and competition based on dietary iron levels | Full Text | References | PDF (3.2 MB) | EPUB | Supplemental
  • 1827 Views
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Article
A novel Mediterranean diet-inspired supplement ameliorates cognitive, microbial, and metabolic deficits in a mouse model of low-grade inflammation
Matthew G. Pontifex, Emily Connell, Gwenaelle Le Gall, Leonie Lang, Line Pourtau, David Gaudout, Cristina Angeloni, Lorenzo Zallocco, Maurizio Ronci, Laura Giusti, Michael Müller & David Vauzour
Article: 2363011
Published online: 04 Jun 2024
AbstractforA novel Mediterranean diet-inspired supplement ameliorates cognitive, microbial, and metabolic deficits in a mouse model of low-grade inflammation | Full Text | References | PDF (5.1 MB) | EPUB | Supplemental
  • 3013 Views
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Open Access

Research Letter

Research Letter
Association between gut microbiota and CpG island methylator phenotype in colorectal cancer
Pyoung Hwa Park, Kelsey Keith, Gennaro Calendo, Jaroslav Jelinek, Jozef Madzo, Raad Z. Gharaibeh, Jayashri Ghosh, Carmen Sapienza, Christian Jobin & Jean-Pierre J. Issa
Article: 2363012
Published online: 11 Jun 2024
AbstractforAssociation between gut microbiota and CpG island methylator phenotype in colorectal cancer | Full Text | References | PDF (4.7 MB) | EPUB | Supplemental
  • 2959 Views
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Research Paper

Article
Modulation of Alzheimer’s disease brain pathology in mice by gut bacterial depletion: the role of IL-17a
Wenlin Hao, Qinghua Luo, Inge Tomic, Wenqiang Quan, Tobias Hartmann, Michael D. Menger, Klaus Fassbender & Yang Liu
Article: 2363014
Published online: 21 Jun 2024
AbstractforModulation of Alzheimer’s disease brain pathology in mice by gut bacterial depletion: the role of IL-17a | Full Text | References | PDF (8.2 MB) | EPUB | Supplemental
  • 3212 Views
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Article
Gut microbiota depletion delays somatic peripheral nerve development and impairs neuromuscular junction maturation
Matilde Cescon, Giovanna Gambarotta, Sonia Calabrò, Chiara Cicconetti, Francesca Anselmi, Svenja Kankowski, Luisa Lang, Marijana Basic, Andre Bleich, Silvia Bolsega, Matthias Steglich, Salvatore Oliviero, Stefania Raimondo, Dario Bizzotto, Kirsten Haastert-Talini & Giulia Ronchi
Article: 2363015
Published online: 07 Jun 2024
AbstractforGut microbiota depletion delays somatic peripheral nerve development and impairs neuromuscular junction maturation | Full Text | References | PDF (7.2 MB) | EPUB | Supplemental
  • 3552 Views
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Article
Microbial metabolite butyrate modulates granzyme B in tolerogenic IL-10 producing Th1 cells to regulate intestinal inflammation
Wenjing Yang, Tianming Yu, Xia Liu, Suxia Yao, Kamil Khanipov, George Golovko, Danyvid Olivares-Villagómez & Yingzi Cong
Article: 2363020
Published online: 06 Jun 2024
AbstractforMicrobial metabolite butyrate modulates granzyme B in tolerogenic IL-10 producing Th1 cells to regulate intestinal inflammation | Full Text | References | PDF (6.3 MB) | EPUB | Supplemental
  • 3458 Views
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Article
Adaptation to tolerate high doses of arabinoxylan is associated with fecal levels of Bifidobacterium longum
Edward C. Deehan, Zhengxiao Zhang, Nguyen K. Nguyen, Maria Elisa Perez-Muñoz, Janis Cole, Alessandra Riva, David Berry, Carla M. Prado & Jens Walter
Article: 2363021
Published online: 11 Jun 2024
AbstractforAdaptation to tolerate high doses of arabinoxylan is associated with fecal levels of Bifidobacterium longum | Full Text | References | PDF (11.3 MB) | EPUB | Supplemental
  • 3851 Views
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Open Access
Article
Probiotics and microbial metabolites maintain barrier and neuromuscular functions and clean protein aggregation to delay disease progression in TDP43 mutation mice
Yongguo Zhang, Yinglin Xia & Jun Sun
Article: 2363880
Published online: 11 Jun 2024
AbstractforProbiotics and microbial metabolites maintain barrier and neuromuscular functions and clean protein aggregation to delay disease progression in TDP43 mutation mice | Full Text | References | PDF (11.3 MB) | EPUB
  • 3267 Views
  • 8 CrossRef citations
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Article
Gut mycobiome alterations in obesity in geographically different regions
Hui Zhan, Yating Wan, Yang Sun, Zhilu Xu, Fen Zhang, Keli Yang, Wenyi Zhu, Chun Pan Cheung, Whitney Tang, Enders Kw Ng, Simon Kh Wong, Yun Kit Yeoh, Francis Kl Chan, Yinglei Miao, Tao Zuo, Zhong Zeng & Siew C Ng
Article: 2367297
Published online: 20 Jun 2024
AbstractforGut mycobiome alterations in obesity in geographically different regions | Full Text | References | PDF (4.7 MB) | EPUB | Supplemental
  • 2846 Views
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Article
Gut microbial features and dietary fiber intake predict gut microbiota response to resistant starch supplementation
Sri Lakshmi Sravani Devarakonda, Dorothy K. Superdock, Jennifer Ren, Lynn M. Johnson, Aura (Alex) P. Loinard-González & Angela C. Poole
Article: 2367301
Published online: 24 Jun 2024
AbstractforGut microbial features and dietary fiber intake predict gut microbiota response to resistant starch supplementation | Full Text | References | PDF (3 MB) | EPUB | Supplemental
  • 5716 Views
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Article
MUP1 mediates urolithin A alleviation of chronic alcohol-related liver disease via gut-microbiota-liver axis
Hongbo Zhang, Chaoyue Li, Lin Han, Yao Xiao, Ji Bian, Chao Liu, Lan Gong, Zhigang Liu & Min Wang
Article: 2367342
Published online: 18 Jun 2024
AbstractforMUP1 mediates urolithin A alleviation of chronic alcohol-related liver disease via gut-microbiota-liver axis | Full Text | References | PDF (8.5 MB) | EPUB | Supplemental
  • 4395 Views
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Open Access
Article
Intratumoral microbiome is associated with gastric cancer prognosis and therapy efficacy
Gangjian Wang, Haojie Wang, Xin Ji, Tong Wang, Ye Zhang, Wenjie Jiang, Lin Meng, Hua-Jun Wu, Xiaofang Xing & Jiafu Ji
Article: 2369336
Published online: 30 Jun 2024
AbstractforIntratumoral microbiome is associated with gastric cancer prognosis and therapy efficacy | Full Text | References | PDF (4.9 MB) | EPUB | Supplemental
  • 3443 Views
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Review

Review Article
Effect of diet on the evolution of gut commensal bacteria
Tanja Dapa & Karina B. Xavier
Article: 2369337
Published online: 21 Jun 2024
AbstractforEffect of diet on the evolution of gut commensal bacteria | Full Text | References | PDF (3.7 MB) | EPUB
  • 2894 Views
  • 2 CrossRef citations
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Research Paper

Article
Heterologous expression and antimicrobial potential of class II bacteriocins
Carola Elisa Heesemann Rosenkilde, Ditte Olsen Lützhøft, Ruben Vazquez-Uribe & Morten Otto Alexander Sommer
Article: 2369338
Published online: 20 Jun 2024
AbstractforHeterologous expression and antimicrobial potential of class II bacteriocins | Full Text | References | PDF (5.8 MB) | EPUB
  • 1993 Views
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Article
The transcriptional regulation of the horizontally acquired iron uptake system, yersiniabactin and its contribution to oxidative stress tolerance and pathogenicity of globally emerging salmonella strains
Imbar Diamant, Boaz Adani, Meir Sylman, Galia Rahav & Ohad Gal-Mor
Article: 2369339
Published online: 04 Jul 2024
AbstractforThe transcriptional regulation of the horizontally acquired iron uptake system, yersiniabactin and its contribution to oxidative stress tolerance and pathogenicity of globally emerging salmonella strains | Full Text | References | PDF (4.8 MB) | EPUB | Supplemental
  • 1664 Views
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Review

Review Article
Signals behind Listeria monocytogenes virulence mechanisms
Diana Meireles, Rita Pombinho & Didier Cabanes
Article: 2369564
Published online: 09 Jul 2024
AbstractforSignals behind Listeria monocytogenes virulence mechanisms | Full Text | References | PDF (2 MB) | EPUB
  • 2967 Views
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Research Paper

Article
Oral histidine affects gut microbiota and MAIT cells improving glycemic control in type 2 diabetes patients
Moritz V. Warmbrunn, Ilias Attaye, Judith Aron-Wisnewsky, Elena Rampanelli, Eduard W.J. van der Vossen, Youling Hao, Annefleur Koopen, Per-Olof Bergh, Daniela Stols-Gonçalves, Nadia Mohamed, Marleen Kemper, Xanthe Verdoes, Koen Wortelboer, Mark Davids, Eugeni Belda, Sébastien André, Stanley Hazen, Karine Clement, Bert Groen, Daniel H. van Raalte, Hilde Herrema, Fredrik Backhed & Max Nieuwdorp
Article: 2370616
Published online: 03 Jul 2024
AbstractforOral histidine affects gut microbiota and MAIT cells improving glycemic control in type 2 diabetes patients | Full Text | References | PDF (3.9 MB) | EPUB
  • 3133 Views
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Article
Restricted intake of sulfur-containing amino acids reversed the hepatic injury induced by excess Desulfovibrio through gut–liver axis
Lingxi Zhou, Gexue Lu, Yawen Nie, Yilin Ren, Jin-Song Shi, Yuzheng Xue, Zheng-Hong Xu & Yan Geng
Article: 2370634
Published online: 27 Jun 2024
AbstractforRestricted intake of sulfur-containing amino acids reversed the hepatic injury induced by excess Desulfovibrio through gut–liver axis | Full Text | References | PDF (12.4 MB) | EPUB | Supplemental
  • 1756 Views
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Article
Gut microbiota-mediated polyphenol metabolism is restrained by parasitic whipworm infection and associated with altered immune function in mice
Audrey Inge Schytz Andersen-Civil, Pankaj Arora, Ling Zhu, Laura J. Myhill, Nilay Büdeyri Gökgöz, Josue L. Castro-Mejia, Milla M. Leppä, Lars H. Hansen, Jacob Lessard-Lord, Juha-Pekka Salminen, Stig M. Thamsborg, Dennis Sandris Nielsen, Yves Desjardins & Andrew R. Williams
Article: 2370917
Published online: 30 Jun 2024
AbstractforGut microbiota-mediated polyphenol metabolism is restrained by parasitic whipworm infection and associated with altered immune function in mice | Full Text | References | PDF (4.5 MB) | EPUB | Supplemental
  • 1738 Views
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Review

Review Article
Implications of microbe-derived ɣ-aminobutyric acid (GABA) in gut and brain barrier integrity and GABAergic signaling in Alzheimer’s disease
Kathryn A. Conn, Emily M. Borsom & Emily K. Cope
Article: 2371950
Published online: 15 Jul 2024
AbstractforImplications of microbe-derived ɣ-aminobutyric acid (GABA) in gut and brain barrier integrity and GABAergic signaling in Alzheimer’s disease | Full Text | References | PDF (1.5 MB) | EPUB
  • 4995 Views
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Research Paper

Article
Washed microbiota transplantation promotes homing of group 3 innate lymphoid cells to the liver via the CXCL16/CXCR6 axis: a potential treatment for metabolic-associated fatty liver disease
Hao-Jie Zhong, Yu-Pei Zhuang, Xinqiang Xie, Jia-Yin Song, Si-Qi Wang, Lei Wu, Yong-Qiang Zhan, Qingping Wu & Xing-Xiang He
Article: 2372881
Published online: 28 Jun 2024
AbstractforWashed microbiota transplantation promotes homing of group 3 innate lymphoid cells to the liver via the CXCL16/CXCR6 axis: a potential treatment for metabolic-associated fatty liver disease | Full Text | References | PDF (12.9 MB) | EPUB | Supplemental
  • 2410 Views
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Review

Review Article
Microbiome and pancreatic cancer: time to think about chemotherapy
Juliana de Castilhos, Katharina Tillmanns, Jana Blessing, Arnelyn Laraño, Vadim Borisov & Christoph K. Stein-Thoeringer
Article: 2374596
Published online: 18 Jul 2024
AbstractforMicrobiome and pancreatic cancer: time to think about chemotherapy | Full Text | References | PDF (1.3 MB) | EPUB
  • 3680 Views
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Research Paper

Article
Quinic acid alleviates high-fat diet-induced neuroinflammation by inhibiting DR3/IKK/NF-κB signaling via gut microbial tryptophan metabolites
Sen Li, Yuwei Cai, Tong Guan, Yu Zhang, Kai Huang, Ze Zhang, Wangqing Cao & Xiao Guan
Article: 2374608
Published online: 07 Jul 2024
AbstractforQuinic acid alleviates high-fat diet-induced neuroinflammation by inhibiting DR3/IKK/NF-κB signaling via gut microbial tryptophan metabolites | Full Text | References | PDF (12.2 MB) | EPUB | Supplemental
  • 4659 Views
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Article
A powerful machine learning approach to identify interactions of differentially abundant gut microbial subsets in patients with metastatic and non-metastatic pancreatic cancer
Annacandida Villani, Andrea Fontana, Concetta Panebianco, Carmelapia Ferro, Massimiliano Copetti, Radmila Pavlovic, Denise Drago, Carla Fiorentini, Fulvia Terracciano, Francesca Bazzocchi, Giuseppe Canistro, Federica Pisati, Evaristo Maiello, Tiziana Pia Latiano, Francesco Perri & Valerio Pazienza
Article: 2375483
Published online: 07 Jul 2024
AbstractforA powerful machine learning approach to identify interactions of differentially abundant gut microbial subsets in patients with metastatic and non-metastatic pancreatic cancer | Full Text | References | PDF (6.1 MB) | EPUB | Supplemental
  • 2787 Views
  • 6 CrossRef citations
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Article
Comprehensive assessment of machine learning methods for diagnosing gastrointestinal diseases through whole metagenome sequencing data
Sungho Lee & Insuk Lee
Article: 2375679
Published online: 07 Jul 2024
AbstractforComprehensive assessment of machine learning methods for diagnosing gastrointestinal diseases through whole metagenome sequencing data | Full Text | References | PDF (5.2 MB) | EPUB | Supplemental
  • 2720 Views
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Article
Gut microbiota promotes macrophage M1 polarization in hepatic sinusoidal obstruction syndrome via regulating intestinal barrier function mediated by butyrate
Si Zhao, Han Zhang, Hanlong Zhu, Tianming Zhao, Jingjing Tu, Xiaochun Yin, Suzhen Yang, Wei Zhang, Feng Zhang, Ming Zhang, Bing Xu, Yuzheng Zhuge & Jiangqiang Xiao
Article: 2377567
Published online: 16 Jul 2024
AbstractforGut microbiota promotes macrophage M1 polarization in hepatic sinusoidal obstruction syndrome via regulating intestinal barrier function mediated by butyrate | Full Text | References | PDF (8 MB) | EPUB | Supplemental
  • 2902 Views
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Research Article

Article
A history of repeated antibiotic usage leads to microbiota-dependent mucus defects
Kertu Liis Krigul, Rachel H. Feeney, Supapit Wongkuna, Oliver Aasmets, Sandra M. Holmberg, Reidar Andreson, Fabiola Puértolas-Balint, Kateryna Pantiukh, Linda Sootak, Tõnis Org, Tanel Tenson, Elin Org & Bjoern O. Schroeder
Article: 2377570
Published online: 21 Jul 2024
AbstractforA history of repeated antibiotic usage leads to microbiota-dependent mucus defects | Full Text | References | PDF (4.6 MB) | EPUB | Supplemental
  • 3823 Views
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Article
Gut microbiota metabolite indole-3-acetic acid maintains intestinal epithelial homeostasis through mucin sulfation
Mengfan Li, Yiyun Ding, Jingge Wei, Yue Dong, Jingyi Wang, Xin Dai, Jing Yan, Feifei Chu, Kexin Zhang, Fanyi Meng, Jiahui Ma, Weilong Zhong, Bangmao Wang, Yunhuan Gao, Rongcun Yang, Xinjuan Liu, Xiaomin Su & Hailong Cao
Article: 2377576
Published online: 27 Jul 2024
AbstractforGut microbiota metabolite indole-3-acetic acid maintains intestinal epithelial homeostasis through mucin sulfation | Full Text | References | PDF (12.2 MB) | EPUB | Supplemental
  • 6843 Views
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Correction

Correction
Correction
Article: 2377878
Published online: 19 Jul 2024
CitationforCorrection | Full Text | PDF (609.6 KB) | EPUB
  • 206 Views
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Research Paper

Article
The crosstalk between efflux pump and resistance gene mutation in Helicobacter pylori
Xiaoling Gong, Youhua Wang, Ying An, Zhen Li, Dongsheng Liu & Xie Yong
Article: 2379439
Published online: 25 Jul 2024
AbstractforThe crosstalk between efflux pump and resistance gene mutation in Helicobacter pylori | Full Text | References | PDF (3.2 MB) | EPUB
  • 1243 Views
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Article
Gene content, phage cycle regulation model and prophage inactivation disclosed by prophage genomics in the Helicobacter pylori Genome Project
Filipa F. Vale, HpGP Research Network, Richard J. Roberts, Ichizo Kobayashi, M. Constanza Camargo & Charles S. Rabkin
Article: 2379440
Published online: 12 Aug 2024
AbstractforGene content, phage cycle regulation model and prophage inactivation disclosed by prophage genomics in the Helicobacter pylori Genome Project | Full Text | References | PDF (2.9 MB) | EPUB | Supplemental
  • 6077 Views
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Article
Bacteroides fragilis alleviates necrotizing enterocolitis through restoring bile acid metabolism balance using bile salt hydrolase and inhibiting FXR-NLRP3 signaling pathway
Zhenhui Chen, Huijuan Chen, Wanwen Huang, Xiaotong Guo, Lu Yu, Jiamin Shan, Xiaoshi Deng, Jiaxin Liu, Wendan Li, Wei Shen & Hongying Fan
Article: 2379566
Published online: 16 Jul 2024
AbstractforBacteroides fragilis alleviates necrotizing enterocolitis through restoring bile acid metabolism balance using bile salt hydrolase and inhibiting FXR-NLRP3 signaling pathway | Full Text | References | PDF (8.5 MB) | EPUB | Supplemental
  • 4685 Views
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Review

Review Article
Mechanisms of intestinal dysbiosis: new insights into tuft cell functions
Nathalie Coutry, Imène Gasmi, Fabien Herbert & Philippe Jay
Article: 2379624
Published online: 23 Jul 2024
AbstractforMechanisms of intestinal dysbiosis: new insights into tuft cell functions | Full Text | References | PDF (1.1 MB) | EPUB
  • 2305 Views
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Research Paper

Article
CRIg+ macrophages deficiency enhanced inflammation damage in IBD due to gut extracellular vesicles containing microbial DNA
Shangshu Nie, Zhongchao Zhang, Yudong Ji, Qiang Ding, Jin Gong, Fang Xiao, Liping Chen, Dean Tian, Mei Liu & Zhenlong Luo
Article: 2379633
Published online: 18 Jul 2024
AbstractforCRIg+ macrophages deficiency enhanced inflammation damage in IBD due to gut extracellular vesicles containing microbial DNA | Full Text | References | PDF (3.5 MB) | EPUB | Supplemental
  • 2439 Views
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Article
Neonatal intestinal colonization of Streptococcus agalactiae and the multiple modes of protection limiting translocation
Kara G. Greenfield, Olivia S. Harlow, Lila T. Witt, Evelyn M. Dziekan, Christian R. Tamar, Josephine Meier, Jane E. Brumbaugh, Emily R. Levy & Kathryn A. Knoop
Article: 2379862
Published online: 23 Jul 2024
AbstractforNeonatal intestinal colonization of Streptococcus agalactiae and the multiple modes of protection limiting translocation | Full Text | References | PDF (3.1 MB) | EPUB | Supplemental
  • 2228 Views
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Article
MS-20 enhances the gut microbiota-associated antitumor effects of anti-PD1 antibody
Pei-Jung Lee, Chien-Min Hung, Ai-Jen Yang, Cheng-Yu Hou, Hung-Wen Chou, Yi-Chung Chang, Wen-Cheng Chu, Wen-Yen Huang, Wen-Chih Kuo, Chia-Chun Yang, Kuo-I Lin, Kuo-Hsuan Hung, Li-Chun Chang, Kang-Yun Lee, Han-Pin Kuo, Kung-Ming Lu, Hsin-Chih Lai, Ming-Liang Kuo & Wan-Jiun Chen
Article: 2380061
Published online: 30 Jul 2024
AbstractforMS-20 enhances the gut microbiota-associated antitumor effects of anti-PD1 antibody | Full Text | References | PDF (7.1 MB) | EPUB | Supplemental
  • 3866 Views
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Article
AIEC-dependent pathogenic Th17 cell transdifferentiation in Crohn’s disease is suppressed by rfaP and ybaT deletion
G. Leccese, M. Chiara, I. Dusetti, D. Noviello, E. Billard, A. Bibi, G. Conte, C. Consolandi, M. Vecchi, MP Conte, N. Barnich, F. Caprioli, F. Facciotti & M. Paroni
Article: 2380064
Published online: 29 Jul 2024
AbstractforAIEC-dependent pathogenic Th17 cell transdifferentiation in Crohn’s disease is suppressed by rfaP and ybaT deletion | Full Text | References | PDF (6.4 MB) | EPUB | Supplemental
  • 1706 Views
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Brief Report

Brief Report
Bacteriophages from treatment-naïve type 2 diabetes individuals drive an inflammatory response in human co-cultures of dendritic cells and T cells
Torsten P. M. Scheithauer, Koen Wortelboer, Maaike Winkelmeijer, Xanthe Verdoes, Ömrüm Aydin, Yair I. Z. Acherman, Maurits L. de Brauw, Max Nieuwdorp, Elena Rampanelli, Patrick A. de Jonge & Hilde Herrema
Article: 2380747
Published online: 27 Jul 2024
AbstractforBacteriophages from treatment-naïve type 2 diabetes individuals drive an inflammatory response in human co-cultures of dendritic cells and T cells | Full Text | References | PDF (1.5 MB) | EPUB | Supplemental
  • 1581 Views
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Research Article

Article
Enhancing recovery from gut microbiome dysbiosis and alleviating DSS-induced colitis in mice with a consortium of rare short-chain fatty acid-producing bacteria
Achuthan Ambat, Linto Antony, Abhijit Maji, Sudeep Ghimire, Samara Mattiello, Purna C. Kashyap, Sunil More, Vanessa Sebastian & Joy Scaria
Article: 2382324
Published online: 29 Jul 2024
AbstractforEnhancing recovery from gut microbiome dysbiosis and alleviating DSS-induced colitis in mice with a consortium of rare short-chain fatty acid-producing bacteria | Full Text | References | PDF (4.1 MB) | EPUB | Supplemental
  • 4289 Views
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Review

Review Article
Gut microbiota-derived fatty acid and sterol metabolites: biotransformation and immunomodulatory functions
Haohao Zhang, Yadong Xie, Fei Cao & Xinyang Song
Article: 2382336
Published online: 24 Jul 2024
AbstractforGut microbiota-derived fatty acid and sterol metabolites: biotransformation and immunomodulatory functions | Full Text | References | PDF (1.4 MB) | EPUB
  • 3097 Views
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Research Paper

Article
AUF1-mediated inhibition of autophagic lysosomal degradation contributes to CagA stability and Helicobacter pylori-induced inflammation
Huiling Zheng, Ting Zhang, Jing Zhang, Jing Ning, Weiwei Fu, Ye Wang, Yanyan Shi, Guochao Wei, Jing Zhang, Xiangmei Chen & Shigang Ding
Article: 2382766
Published online: 28 Jul 2024
AbstractforAUF1-mediated inhibition of autophagic lysosomal degradation contributes to CagA stability and Helicobacter pylori-induced inflammation | Full Text | References | PDF (7.7 MB) | EPUB | Supplemental
  • 2070 Views
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Research PAPER

Article
Serum bile acids profiles are altered without change of the gut microbiota composition following a seven-day prednisolone therapy in severe alcoholic hepatitis
Damien Esparteiro, Grégory Fouquet, Anoïsia Courtois, Guillaume Jedraszak, Léa Marticho, Mathilde Gourdel, Stéphanie Billon-Crossouard, Mikaël Croyal, Mickaël Naassila, Eric Nguyen-Khac & Ingrid Marcq
Article: 2382767
Published online: 30 Jul 2024
AbstractforSerum bile acids profiles are altered without change of the gut microbiota composition following a seven-day prednisolone therapy in severe alcoholic hepatitis | Full Text | References | PDF (2 MB) | EPUB | Supplemental
  • 1624 Views
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Review

Review Article
Current insights on gut microbiome and chronic urticaria: progress in the pathogenesis and opportunities for novel therapeutic approaches
Rui Cai, Changhan Zhou, Ruisi Tang, Yuanling Meng, Jumei Zeng, Yuqing Li & Xiang Wen
Article: 2382774
Published online: 30 Jul 2024
AbstractforCurrent insights on gut microbiome and chronic urticaria: progress in the pathogenesis and opportunities for novel therapeutic approaches | Full Text | References | PDF (3.9 MB) | EPUB
  • 2729 Views
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Research Paper

Article
The fecal microbiota of patients with primary biliary cholangitis (PBC) causes PBC-like liver lesions in mice and exacerbates liver damage in a mouse model of PBC
Huiyong Jiang, Ying Yu, Xiaoxiang Hu, Bingbing Du, Yini Shao, Feiyu Wang, Lifeng Chen, Ren Yan, Lanjuan Li & Longxian Lv
Article: 2383353
Published online: 06 Aug 2024
AbstractforThe fecal microbiota of patients with primary biliary cholangitis (PBC) causes PBC-like liver lesions in mice and exacerbates liver damage in a mouse model of PBC | Full Text | References | PDF (6.4 MB) | EPUB | Supplemental
  • 2902 Views
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Article
A cohort study in family triads: impact of gut microbiota composition and early life exposures on intestinal resistome during the first two years of life
Roosa Jokela, Katariina MM Pärnänen, Alise J Ponsero, Leo Lahti, Kaija-Leena Kolho, Willem M de Vos & Anne Salonen
Article: 2383746
Published online: 02 Aug 2024
AbstractforA cohort study in family triads: impact of gut microbiota composition and early life exposures on intestinal resistome during the first two years of life | Full Text | References | PDF (5.5 MB) | EPUB | Supplemental
  • 2076 Views
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Review

Review Article
The early life exposome and autism risk: a role for the maternal microbiome?
Claudia M. Di Gesù & Shelly A. Buffington
Article: 2385117
Published online: 09 Aug 2024
AbstractforThe early life exposome and autism risk: a role for the maternal microbiome? | Full Text | References | PDF (1 MB) | EPUB
  • 3005 Views
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Research Paper

Article
Supplier-origin gut microbiomes affect host body weight and select autism-related behaviors
Zachary L McAdams, Kevin L Gustafson, Amber L Russell, Rachel Self, Amy L Petry, Teresa E Lever & Aaron C Ericsson
Article: 2385524
Published online: 06 Aug 2024
AbstractforSupplier-origin gut microbiomes affect host body weight and select autism-related behaviors | Full Text | References | PDF (2.4 MB) | EPUB | Supplemental
  • 1256 Views
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Article
Pseudocin 196, a novel lantibiotic produced by Bifidobacterium pseudocatenulatum elicits antimicrobial activity against clinically relevant pathogens
Rocio Sanchez-Gallardo, Paula M. O’Connor, Ian J. O’Neill, Brian McDonnell, Ciaran Lee, Rebecca L. Moore, Fionnuala M. McAuliffe, Paul D. Cotter & Douwe van Sinderen
Article: 2387139
Published online: 06 Aug 2024
AbstractforPseudocin 196, a novel lantibiotic produced by Bifidobacterium pseudocatenulatum elicits antimicrobial activity against clinically relevant pathogens | Full Text | References | PDF (3.6 MB) | EPUB | Supplemental
  • 2044 Views
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Review

Review Article
Phage lysins for intestinal microbiome modulation: current challenges and enabling techniques
Iris Pottie, Roberto Vázquez Fernández, Tom Van de Wiele & Yves Briers
Article: 2387144
Published online: 06 Aug 2024
AbstractforPhage lysins for intestinal microbiome modulation: current challenges and enabling techniques | Full Text | References | PDF (852.6 KB) | EPUB
  • 2528 Views
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Review Article
Microbial metabolism marvels: a comprehensive review of microbial drug transformation capabilities
Filippo Martinelli & Ines Thiele
Article: 2387400
Published online: 16 Aug 2024
AbstractforMicrobial metabolism marvels: a comprehensive review of microbial drug transformation capabilities | Full Text | References | PDF (7 MB) | EPUB | Supplemental
  • 2286 Views
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Research Paper

Article
Gut microbiota-mediated C-sulfonate metabolism impairs the bioavailability and anti-cholestatic efficacy of andrographolide
Dafu Tang, Wanyu Hu, Bingxuan Fu, Xiaojie Zhao, Guoquan You, Cong Xie, Hong Yu Wang, Xueni Guo, Qianbing Zhang, Zhongqiu Liu & Ling Ye
Article: 2387402
Published online: 12 Sep 2024
AbstractforGut microbiota-mediated C-sulfonate metabolism impairs the bioavailability and anti-cholestatic efficacy of andrographolide | Full Text | References | PDF (11.1 MB) | EPUB | Supplemental
  • 1654 Views
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Review

Review Article
Game of microbes: the battle within – gut microbiota and multiple sclerosis
Ti-Ara Turner, Peter Lehman, Sudeep Ghimire, Shailesh K. Shahi & Ashutosh Mangalam
Article: 2387794
Published online: 08 Aug 2024
AbstractforGame of microbes: the battle within – gut microbiota and multiple sclerosis | Full Text | References | PDF (1.2 MB) | EPUB
  • 3515 Views
  • 4 CrossRef citations
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Review Article
Dietary fiber for the prevention of childhood obesity: a focus on the involvement of the gut microbiota
Zhongmin Yang, Mingyue Yang, Edward C. Deehan, Chenxi Cai, Karen L. Madsen, Eytan Wine, Guiling Li, Jian Li, Jingwen Liu & Zhengxiao Zhang
Article: 2387796
Published online: 20 Aug 2024
AbstractforDietary fiber for the prevention of childhood obesity: a focus on the involvement of the gut microbiota | Full Text | References | PDF (10.1 MB) | EPUB | Supplemental
  • 2320 Views
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Review Article
Microbiota–gut–brain axis: interplay between microbiota, barrier function and lymphatic system
Miaomiao Zhuang, Xun Zhang & Jun Cai
Article: 2387800
Published online: 25 Aug 2024
AbstractforMicrobiota–gut–brain axis: interplay between microbiota, barrier function and lymphatic system | Full Text | References | PDF (1 MB) | EPUB
  • 4678 Views
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Research Paper

Article
Proteolytic bacteria expansion during colitis amplifies inflammation through cleavage of the external domain of PAR2
Liam Emile Rondeau, Bruna Barbosa Da Luz, Alba Santiago, Miriam Bermudez-Brito, Amber Hann, Giada De Palma, Jennifer Jury, Xuanyu Wang, Elena Francisca Verdu, Heather Jean Galipeau, Corinne Rolland, Celine Deraison, Wolfram Ruf, Premysl Bercik, Nathalie Vergnolle & Alberto Caminero
Article: 2387857
Published online: 22 Aug 2024
AbstractforProteolytic bacteria expansion during colitis amplifies inflammation through cleavage of the external domain of PAR2 | Full Text | References | PDF (3.6 MB) | EPUB | Supplemental
  • 2153 Views
  • 1 CrossRef citations
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Open Access
Article
Comparison of gnotobiotic communities reveals milk-adapted metabolic functions and unexpected amino acid metabolism by the pre-weaning microbiome
Jean-Bernard Lubin, Michael A. Silverman & Paul J. Planet
Article: 2387875
Published online: 12 Aug 2024
AbstractforComparison of gnotobiotic communities reveals milk-adapted metabolic functions and unexpected amino acid metabolism by the pre-weaning microbiome | Full Text | References | PDF (3.6 MB) | EPUB | Supplemental
  • 1243 Views
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Open Access

Brief Report

Brief Report
Dysfunctional mucus structure in cystic fibrosis increases vulnerability to colibactin-mediated DNA adducts in the colon mucosa
Amanda Mandarino Alves, Chiara Lecchi, Sharon Lopez, Alessia Stornetta, Prince P. Mathai, Peter W. Villalta, Satoshi Ishii, Emily P. Balskus, Silvia Balbo & Alexander Khoruts
Article: 2387877
Published online: 12 Aug 2024
AbstractforDysfunctional mucus structure in cystic fibrosis increases vulnerability to colibactin-mediated DNA adducts in the colon mucosa | Full Text | References | PDF (936.3 KB) | EPUB
  • 1552 Views
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Research Paper

Article
Disentangle beneficial effects of strain engraftment after fecal microbiota transplantation in subjects with MetSyn
Eduard W. J. van der Vossen, Mark Davids, Bas Voermans, Koen Wortelboer, Annick V. Hartstra, Annefleur M. Koopen, Pieter de Groot, Evgeni Levin & Max Nieuwdorp
Article: 2388295
Published online: 20 Aug 2024
AbstractforDisentangle beneficial effects of strain engraftment after fecal microbiota transplantation in subjects with MetSyn | Full Text | References | PDF (2.2 MB) | EPUB | Supplemental
  • 1143 Views
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Open Access
Article
Porphyromonas gingivalis fuels colorectal cancer through CHI3L1-mediated iNKT cell-driven immune evasion
Angélica Díaz-Basabe, Georgia Lattanzi, Federica Perillo, Chiara Amoroso, Alberto Baeri, Andrea Farini, Yvan Torrente, Giuseppe Penna, Maria Rescigno, Michele Ghidini, Elisa Cassinotti, Ludovica Baldari, Luigi Boni, Maurizio Vecchi, Flavio Caprioli, Federica Facciotti & Francesco Strati
Article: 2388801
Published online: 12 Aug 2024
AbstractforPorphyromonas gingivalis fuels colorectal cancer through CHI3L1-mediated iNKT cell-driven immune evasion | Full Text | References | PDF (2.6 MB) | EPUB | Supplemental
  • 2644 Views
  • 7 CrossRef citations
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Open Access
Article
Machine learning-causal inference based on multi-omics data reveals the association of altered gut bacteria and bile acid metabolism with neonatal jaundice
Wanling Chen, Peng Zhang, Xueli Zhang, Tiantian Xiao, Jianhai Zeng, Kaiping Guo, Huixian Qiu, Guoqiang Cheng, Zhangxing Wang, Wenhao Zhou, Shujuan Zeng & Mingbang Wang
Article: 2388805
Published online: 21 Aug 2024
AbstractforMachine learning-causal inference based on multi-omics data reveals the association of altered gut bacteria and bile acid metabolism with neonatal jaundice | Full Text | References | PDF (5.3 MB) | EPUB | Supplemental
  • 3762 Views
  • 3 CrossRef citations
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Open Access
Article
Age-associated temporal decline in butyrate-producing bacteria plays a key pathogenic role in the onset and progression of neuropathology and memory deficits in 3×Tg-AD mice
Paula M. Chilton, Smita S. Ghare, Benjamin T. Charpentier, Scott A. Myers, Aakarsha V. Rao, Joseph F. Petrosino, Kristi L. Hoffman, John C. Greenwell, Neetu Tyagi, Jyotirmaya Behera, Yali Wang, Lucy J. Sloan, JingWen Zhang, Christopher B. Shields, Gregory E. Cooper, Leila Gobejishvili, Scott R. Whittemore, Craig J. McClain & Shirish S. Barve
Article: 2389319
Published online: 25 Aug 2024
AbstractforAge-associated temporal decline in butyrate-producing bacteria plays a key pathogenic role in the onset and progression of neuropathology and memory deficits in 3×Tg-AD mice | Full Text | References | PDF (5.9 MB) | EPUB | Supplemental
  • 2558 Views
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Review

Review Article
Deciphering internal and external factors influencing intestinal junctional complexes
Zachary Markovich, Adriana Abreu, Yi Sheng, Sung Min Han & Rui Xiao
Article: 2389320
Published online: 16 Aug 2024
AbstractforDeciphering internal and external factors influencing intestinal junctional complexes | Full Text | References | PDF (3.6 MB) | EPUB
  • 2143 Views
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Open Access

Brief Report

Brief Report
Symbiotic biofilms formed by Clostridioides difficile and bacteroides thetaiotaomicron in the presence of vancomycin
Jingpeng Yang, Wen Rui, Saiwei Zhong, Xiaoqian Li, Wenzheng Liu, Lingtong Meng, Yanan Li & He Huang
Article: 2390133
Published online: 12 Aug 2024
AbstractforSymbiotic biofilms formed by Clostridioides difficile and bacteroides thetaiotaomicron in the presence of vancomycin | Full Text | References | PDF (3.3 MB) | EPUB | Supplemental
  • 1915 Views
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Open Access

Commentary and view

Comment
Microbiota and plasticity of antigen-presenting ILC3s: impact on antitumor immune response
Alessia Calabrò, Fabiana Drommi, Claudia De Pasquale, Giuseppe Navarra, Paolo Carrega, Irene Bonaccorsi, Guido Ferlazzo & Stefania Campana
Article: 2390135
Published online: 19 Aug 2024
AbstractforMicrobiota and plasticity of antigen-presenting ILC3s: impact on antitumor immune response | Full Text | References | PDF (606.2 KB) | EPUB
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Research Paper

Article
Quercetin activates energy expenditure to combat metabolic syndrome through modulating gut microbiota-bile acids crosstalk in mice
Xiaoqiang Zhu, Xiaojuan Dai, Lijun Zhao, Jing Li, Yanhong Zhu, Wenjuan He, Xinlei Guan, Tao Wu, Li Liu, Hongping Song & Liang Lei
Article: 2390136
Published online: 20 Aug 2024
AbstractforQuercetin activates energy expenditure to combat metabolic syndrome through modulating gut microbiota-bile acids crosstalk in mice | Full Text | References | PDF (9.3 MB) | EPUB | Supplemental
  • 3804 Views
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Article
Time-restricted feeding ameliorates non-alcoholic fatty liver disease through modulating hepatic nicotinamide metabolism via gut microbiota remodeling
Ruijia Feng, Wenchao Yang, Weiqi Feng, Xiuyi Huang, Meifeng Cen, Guiyan Peng, Wenrui Wu, Zhecun Wang, Yexiang Jing, Ting Long, Yunchong Liu, Zilun Li, Guangqi Chang & Kan Huang
Article: 2390164
Published online: 18 Aug 2024
AbstractforTime-restricted feeding ameliorates non-alcoholic fatty liver disease through modulating hepatic nicotinamide metabolism via gut microbiota remodeling | Full Text | References | PDF (4.3 MB) | EPUB | Supplemental
  • 3211 Views
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Research paper

Article
Lactobacillus acidophilus ameliorates cholestatic liver injury through inhibiting bile acid synthesis and promoting bile acid excretion
Lingyi Wu, Jianchun Zhou, An Zhou, Yuanyuan Lei, Li Tang, Shiping Hu, Sumin Wang, Xu Xiao, Qiao Chen, Dianji Tu, Cheng Lu, Yi Lai, Yiding Li, Xiao Zhang, Bo Tang & Shiming Yang
Article: 2390176
Published online: 29 Aug 2024
AbstractforLactobacillus acidophilus ameliorates cholestatic liver injury through inhibiting bile acid synthesis and promoting bile acid excretion | Full Text | References | PDF (4.9 MB) | EPUB | Supplemental
  • 4836 Views
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Research Paper

Article
Inflammation promotes stomach epithelial defense by stimulating the secretion of antimicrobial peptides in the mucus
Megi Vllahu, Antonia Voli, Valerio Licursi, Claudia Zagami, Antonella D’Amore, Jan Traulsen, Sara Woelffling, Monika Schmid, Robbie Crickley, Richard Lisle, Alexander Link, Alessandra Tosco, Thomas F. Meyer & Francesco Boccellato
Article: 2390680
Published online: 08 Sep 2024
AbstractforInflammation promotes stomach epithelial defense by stimulating the secretion of antimicrobial peptides in the mucus | Full Text | References | PDF (15 MB) | EPUB | Supplemental
  • 2916 Views
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Review

Review Article
Role of bacteriophages in shaping gut microbial community
Md. Rayhan Mahmud, Sanjida Khanam Tamanna, Sharmin Akter, Lincon Mazumder, Sumona Akter, Md. Rakibul Hasan, Mrityunjoy Acharjee, Israt Zahan Esti, Md. Saidul Islam, Md. Maksudur Rahman Shihab, Md. Nahian, Rubaiya Gulshan, Sadia Naser & Anna Maria Pirttilä
Article: 2390720
Published online: 21 Aug 2024
AbstractforRole of bacteriophages in shaping gut microbial community | Full Text | References | PDF (3.3 MB) | EPUB
  • 3051 Views
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Research Paper

Article
Limited predictive value of the gut microbiome and metabolome for response to biological therapy in inflammatory bowel disease
Femke M. Prins, Iwan J. Hidding, Marjolein A.Y. Klaassen, Valerie Collij, Johannes P.D. Schultheiss, Werna T.C. Uniken Venema, Amber Bangma, Jurne B. Aardema, Bernadien H. Jansen, Wout G.N. Mares, Ben J.M. Witteman, Eleonora A.M. Festen, Gerard Dijkstra, Marijn C. Visschedijk, Herma H. Fidder, Arnau Vich Vila, Bas Oldenburg, Ranko Gacesa & Rinse K. Weersma
Article: 2391505
Published online: 21 Aug 2024
AbstractforLimited predictive value of the gut microbiome and metabolome for response to biological therapy in inflammatory bowel disease | Full Text | References | PDF (3 MB) | EPUB | Supplemental
  • 2219 Views
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Article
Synergism of Fusobacterium periodonticum and N-nitrosamines promote the formation of EMT subtypes in ESCC by modulating Wnt3a palmitoylation
Mingjun Sun, Zhenyan Peng, Weitao Shen, Xinxin Guo, Yinghao Liao, Yang Huang, Ping Ye, Mohan Hu, Qiang Lin & Ran Liu
Article: 2391521
Published online: 28 Aug 2024
AbstractforSynergism of Fusobacterium periodonticum and N-nitrosamines promote the formation of EMT subtypes in ESCC by modulating Wnt3a palmitoylation | Full Text | References | PDF (8.5 MB) | EPUB | Supplemental
  • 2279 Views
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Article
Gut microbiota mediates anxiety-like behaviors induced by chronic infection of Toxoplasma gondii in mice
Xiaotong Luo, Xiaoying Yang, Shimin Tan, Yongsheng Zhang, Yunqiu Liu, Xiaokang Tian, Yingting Huang, Yuying Zhou, Cheng He, Kun Yin, Daxiang Xu, Xiangyang Li, Fenfen Sun, Renxian Tang, Jianping Cao, Kuiyang Zheng, Yinghua Yu & Wei Pan
Article: 2391535
Published online: 25 Aug 2024
AbstractforGut microbiota mediates anxiety-like behaviors induced by chronic infection of Toxoplasma gondii in mice | Full Text | References | PDF (9.9 MB) | EPUB | Supplemental
  • 2754 Views
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Review

Review Article
Microbiota during pregnancy and early life: role in maternal−neonatal outcomes based on human evidence
Alessio Fasano, Benoit Chassaing, Dirk Haller, Eduard Flores Ventura, Maria Carmen-Collado, Nitida Pastor, Omry Koren & Roberto Berni Canani
Article: 2392009
Published online: 19 Aug 2024
AbstractforMicrobiota during pregnancy and early life: role in maternal−neonatal outcomes based on human evidence | Full Text | References | PDF (386.9 KB) | EPUB
  • 3640 Views
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Research Paper

Article
Changes in intestinal permeability and gut microbiota following diet-induced weight loss in patients with metabolic dysfunction-associated steatohepatitis and liver fibrosis
Dimitrios A. Koutoukidis, Sandi Yen, Paula Gomez Castro, Mariya Misheva, Susan A. Jebb, Paul Aveyard, Jeremy W. Tomlinson, Ferenc E. Mozes, Jeremy F. Cobbold, Jethro S. Johnson & Julian R. Marchesi
Article: 2392864
Published online: 28 Sep 2024
AbstractforChanges in intestinal permeability and gut microbiota following diet-induced weight loss in patients with metabolic dysfunction-associated steatohepatitis and liver fibrosis | Full Text | References | PDF (1.6 MB) | EPUB | Supplemental
  • 2122 Views
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Article
Prevention and cure of murine C. difficile infection by a Lachnospiraceae strain
Juan Noriega Tejada, William A. Walters, Yanling Wang, Melissa Kordahi, Benoit Chassaing, Joseph Pickard, Gabriel Nunez, Ruth Ley & Andrew T. Gewirtz
Article: 2392872
Published online: 27 Aug 2024
AbstractforPrevention and cure of murine C. difficile infection by a Lachnospiraceae strain | Full Text | References | PDF (6.1 MB) | EPUB | Supplemental
  • 2170 Views
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Article
Chronic binge drinking-induced susceptibility to colonic inflammation is microbiome-dependent
Diogo Fonseca-Pereira, Sena Bae, Monia Michaud, Jonathan N. Glickman & Wendy S. Garrett
Article: 2392874
Published online: 20 Aug 2024
AbstractforChronic binge drinking-induced susceptibility to colonic inflammation is microbiome-dependent | Full Text | References | PDF (4.5 MB) | EPUB | Supplemental
  • 2431 Views
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Article
Examination of sex-specific interactions between gut microbiota and host metabolism after 12-week combined polyphenol supplementation in individuals with overweight or obesity
Kelly M. Jardon, Gijs H. Goossens, Jasper Most, Gianluca Galazzo, Koen Venema, John Penders & Ellen E. Blaak
Article: 2392875
Published online: 25 Aug 2024
AbstractforExamination of sex-specific interactions between gut microbiota and host metabolism after 12-week combined polyphenol supplementation in individuals with overweight or obesity | Full Text | References | PDF (2.8 MB) | EPUB | Supplemental
  • 3143 Views
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Article
Fecal virus-like particles are sufficient to reduce necrotizing enterocolitis
Simone Margaard Offersen, Xiaotian Mao, Malene Roed Spiegelhauer, Frej Larsen, Viktoria Rose Li, Dennis Sandris Nielsen, Lise Aunsholt, Thomas Thymann & Anders Brunse
Article: 2392876
Published online: 22 Aug 2024
AbstractforFecal virus-like particles are sufficient to reduce necrotizing enterocolitis | Full Text | References | PDF (5.4 MB) | EPUB | Supplemental
  • 2089 Views
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Article
Bacterial amyloid curli activates the host unfolded protein response via IRE1α in the presence of HLA-B27
Kaitlyn Grando, Shingo Bessho, Kayla Harrell, Kathrine Kyrylchuk, Alejandro M. Pantoja, Sophia Olubajo, Francisco J. Albicoro, Andres Klein-Szanto & Çagla Tükel
Article: 2392877
Published online: 27 Aug 2024
AbstractforBacterial amyloid curli activates the host unfolded protein response via IRE1α in the presence of HLA-B27 | Full Text | References | PDF (6.1 MB) | EPUB | Supplemental
  • 1550 Views
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Article
Gut microbiome profiles to exclude the diagnosis of hepatic encephalopathy in patients with cirrhosis
Jasmohan S Bajaj, Jacqueline G O’Leary, Sofia S Jakab, Andrew Fagan, Masoumeh Sikaroodi & Patrick M Gillevet
Article: 2392880
Published online: 27 Aug 2024
AbstractforGut microbiome profiles to exclude the diagnosis of hepatic encephalopathy in patients with cirrhosis | Full Text | References | PDF (1.6 MB) | EPUB
  • 1836 Views
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Review

Review Article
The interplay between gut microbiota, short-chain fatty acids, and implications for host health and disease
Kallie E. Hays, Jacob M. Pfaffinger & Rebecca Ryznar
Article: 2393270
Published online: 16 Sep 2024
AbstractforThe interplay between gut microbiota, short-chain fatty acids, and implications for host health and disease | Full Text | References | PDF (5.1 MB) | EPUB | Supplemental
  • 5063 Views
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Review Article
Ethanol-induced changes to the gut microbiome compromise the intestinal homeostasis: a review
Konrad Sosnowski & Adam Przybyłkowski
Article: 2393272
Published online: 03 Sep 2024
AbstractforEthanol-induced changes to the gut microbiome compromise the intestinal homeostasis: a review | Full Text | References | PDF (2 MB) | EPUB
  • 2000 Views
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Research Paper

Article
Consistent signatures in the human gut microbiome of longevous populations
Shu Chen, Zhao Zhang, Sanxin Liu, Tao Chen, Zhengqi Lu, Wenjing Zhao, Xiangyu Mou & Sheng Liu
Article: 2393756
Published online: 28 Aug 2024
AbstractforConsistent signatures in the human gut microbiome of longevous populations | Full Text | References | PDF (1.4 MB) | EPUB | Supplemental
  • 4522 Views
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Review

Review Article
Bile acids impact the microbiota, host, and C. difficile dynamics providing insight into mechanisms of efficacy of FMTs and microbiota-focused therapeutics
Arthur S. McMillan & Casey M. Theriot
Article: 2393766
Published online: 03 Sep 2024
AbstractforBile acids impact the microbiota, host, and C. difficile dynamics providing insight into mechanisms of efficacy of FMTs and microbiota-focused therapeutics | Full Text | References | PDF (871.6 KB) | EPUB
  • 2635 Views
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Research Article

Article
MRGM: an enhanced catalog of mouse gut microbial genomes substantially broadening taxonomic and functional landscapes
Nayeon Kim, Chan Yeong Kim, Junyeong Ma, Sunmo Yang, Dong Jin Park, Sang-Jun Ha, Peter Belenky & Insuk Lee
Article: 2393791
Published online: 04 Sep 2024
AbstractforMRGM: an enhanced catalog of mouse gut microbial genomes substantially broadening taxonomic and functional landscapes | Full Text | References | PDF (3.4 MB) | EPUB | Supplemental
  • 1784 Views
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Review

Review Article
Microbiota and glioma: a new perspective from association to clinical translation
Wenhui Wang, Zihao Ou, Xixin Huang, Jingyu Wang, Qianbei Li, Minghui Wen & Lei Zheng
Article: 2394166
Published online: 26 Aug 2024
AbstractforMicrobiota and glioma: a new perspective from association to clinical translation | Full Text | References | PDF (1.8 MB) | EPUB
  • 1901 Views
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Research Paper

Article
Gut virome and microbiome dynamics before and after SARS-CoV-2 infection in women living with HIV and their infants
Rabia Maqsood, LaRinda A. Holland, Lily I. Wu, Emily R. Begnel, Judith Adhiambo, Prestone Owiti, Bhavna H. Chohan, Soren Gantt, John Kinuthia, Dalton Wamalwa, Ednah Ojee, Barbra A. Richardson, Jennifer Slyker, Dara A. Lehman & Efrem S. Lim
Article: 2394248
Published online: 26 Aug 2024
AbstractforGut virome and microbiome dynamics before and after SARS-CoV-2 infection in women living with HIV and their infants | Full Text | References | PDF (3.2 MB) | EPUB | Supplemental
  • 1165 Views
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Article
Fecal let-7b and miR-21 directly modulate the intestinal microbiota, driving chronic inflammation
Maite Casado-Bedmar, Maryline Roy, Louis Berthet, Jean-Pierre Hugot, Chunhua Yang, Hana Manceau, Katell Peoc’h, Benoit Chassaing, Didier Merlin & Emilie Viennois
Article: 2394249
Published online: 03 Sep 2024
AbstractforFecal let-7b and miR-21 directly modulate the intestinal microbiota, driving chronic inflammation | Full Text | References | PDF (4.9 MB) | EPUB | Supplemental
  • 2727 Views
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Article
Effects of postbiotics on chronic diarrhea in young adults: a randomized, double-blind, placebo-controlled crossover trial assessing clinical symptoms, gut microbiota, and metabolite profiles
Shuai Guo, Teng Ma, Lai-Yu Kwok, Keyu Quan, Bohai Li, Huan Wang, Heping Zhang, Bilige Menghe & Yongfu Chen
Article: 2395092
Published online: 27 Aug 2024
AbstractforEffects of postbiotics on chronic diarrhea in young adults: a randomized, double-blind, placebo-controlled crossover trial assessing clinical symptoms, gut microbiota, and metabolite profiles | Full Text | References | PDF (7.6 MB) | EPUB | Supplemental
  • 3227 Views
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Review

Review Article
The hidden base of the iceberg: gut peptidoglycome dynamics is foundational to its influence on the host
Richard Wheeler & Ivo Gomperts Boneca
Article: 2395099
Published online: 06 Sep 2024
AbstractforThe hidden base of the iceberg: gut peptidoglycome dynamics is foundational to its influence on the host | Full Text | References | PDF (3.9 MB) | EPUB
  • 1790 Views
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Research Paper

Article
Fecal microbiota transplantation derived from mild cognitive impairment individuals impairs cerebral glucose uptake and cognitive function in wild-type mice: Bacteroidetes and TXNIP-GLUT signaling pathway
Tao Wang, Ling Hao, Kexin Yang, Wenjing Feng, Zhiting Guo, Miao Liu & Rong Xiao
Article: 2395907
Published online: 12 Sep 2024
AbstractforFecal microbiota transplantation derived from mild cognitive impairment individuals impairs cerebral glucose uptake and cognitive function in wild-type mice: Bacteroidetes and TXNIP-GLUT signaling pathway | Full Text | References | PDF (7.2 MB) | EPUB | Supplemental
  • 1873 Views
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Review

Review Article
Bacterial extracellular vesicles at the interface of gut microbiota and immunity
Inês Melo-Marques, Sandra Morais Cardoso & Nuno Empadinhas
Article: 2396494
Published online: 28 Sep 2024
AbstractforBacterial extracellular vesicles at the interface of gut microbiota and immunity | Full Text | References | PDF (5.4 MB) | EPUB
  • 2765 Views
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Research Paper

Article
Gut microbiota-derived butyrate selectively interferes with growth of carbapenem-resistant Escherichia coli based on their resistance mechanism
Eva Happ, Kora Schulze, Zinia Afrin, Sabrina Woltemate, Pia Görner, Stefan Ziesing, Dirk Schlüter, Robert Geffers, Volker Winstel & Marius Vital
Article: 2397058
Published online: 18 Sep 2024
AbstractforGut microbiota-derived butyrate selectively interferes with growth of carbapenem-resistant Escherichia coli based on their resistance mechanism | Full Text | References | PDF (4.4 MB) | EPUB | Supplemental
  • 1524 Views
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Review

Review Article
Benefits and concerns of probiotics: an overview of the potential genotoxicity of the colibactin-producing Escherichia coli Nissle 1917 strain
Luca Falzone, Alessandro Lavoro, Saverio Candido, Mario Salmeri, Antonino Zanghì & Massimo Libra
Article: 2397874
Published online: 04 Sep 2024
AbstractforBenefits and concerns of probiotics: an overview of the potential genotoxicity of the colibactin-producing Escherichia coli Nissle 1917 strain | Full Text | References | PDF (1.5 MB) | EPUB
  • 2828 Views
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Research Paper

Article
FMT rescues mice from DSS-induced colitis in a STING-dependent manner
Dan Pu, Yao Yao, Chuan Zhou, Ruixian Liu, Zhihong Wang, Yan Liu, Dandan Wang, Binbin Wang, Yaohe Wang, Zhanju Liu, Zhe Zhang & Baisui Feng
Article: 2397879
Published online: 26 Sep 2024
AbstractforFMT rescues mice from DSS-induced colitis in a STING-dependent manner | Full Text | References | PDF (35.6 MB) | EPUB | Supplemental
  • 3270 Views
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Article
Segmental patterning of microbiota and immune cells in the murine intestinal tract
Harithaa Anandakumar, Ariana Rauch, Moritz I. Wimmer, Alex Yarritu, Gudrun Koch, Victoria McParland, Hendrik Bartolomaeus & Nicola Wilck
Article: 2398126
Published online: 10 Sep 2024
AbstractforSegmental patterning of microbiota and immune cells in the murine intestinal tract | Full Text | References | PDF (4.6 MB) | EPUB | Supplemental
  • 2870 Views
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Article
Empowering probiotics with high xanthine transport for effective hyperuricemia management
Zhen-Ping Zou, Ju-Ling Li, Yi-Fan Zhang, Ying Zhou & Bang-Ce Ye
Article: 2399213
Published online: 17 Sep 2024
AbstractforEmpowering probiotics with high xanthine transport for effective hyperuricemia management | Full Text | References | PDF (2.8 MB) | EPUB | Supplemental
  • 2653 Views
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Article
Enterotoxigenic Escherichia coli heat labile enterotoxin affects neutrophil effector functions via cAMP/PKA/ERK signaling
Jinglin Ma, Leen Hermans, Matthias Dierick, Hans Van der Weken, Eric Cox & Bert Devriendt
Article: 2399215
Published online: 16 Sep 2024
AbstractforEnterotoxigenic Escherichia coli heat labile enterotoxin affects neutrophil effector functions via cAMP/PKA/ERK signaling | Full Text | References | PDF (6.3 MB) | EPUB | Supplemental
  • 1395 Views
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Article
Protection against fibrosis by a bacterial consortium in metabolic dysfunction-associated steatohepatitis and the role of amino acid metabolism
Suet-Ying Kwan, Kristyn A. Gonzales, Mohamed A. Jamal, Heather L. Stevenson, Lin Tan, Philip L. Lorenzi, P. Andrew Futreal, Ernest T. Hawk, Joseph B. McCormick, Susan P. Fisher-Hoch, Robert R. Jenq & Laura Beretta
Article: 2399260
Published online: 06 Sep 2024
AbstractforProtection against fibrosis by a bacterial consortium in metabolic dysfunction-associated steatohepatitis and the role of amino acid metabolism | Full Text | References | PDF (4.4 MB) | EPUB | Supplemental
  • 1768 Views
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Review

Review Article
Effect of diet on the gut mycobiome and potential implications in inflammatory bowel disease
J. Buttar, E. Kon, A. Lee, G. Kaur & G. Lunken
Article: 2399360
Published online: 17 Sep 2024
AbstractforEffect of diet on the gut mycobiome and potential implications in inflammatory bowel disease | Full Text | References | PDF (999.4 KB) | EPUB
  • 2366 Views
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Research Paper

Article
EspH utilizes phosphoinositide and Rab binding domains to interact with plasma membrane infection sites and Rab GTPases*
Ipsita Nandi, Rachana Pattani Ramachandran, Deborah E. Shalev, Dina Schneidman-Duhovny, Raisa Shtuhin-Rahav, Naomi Melamed-Book, Efrat Zlotkin-Rivkin, Alexander Rouvinski, Ilan Rosenshine & Benjamin Aroeti
Article: 2400575
Published online: 23 Sep 2024
AbstractforEspH utilizes phosphoinositide and Rab binding domains to interact with plasma membrane infection sites and Rab GTPases* | Full Text | References | PDF (8.8 MB) | EPUB | Supplemental
  • 912 Views
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Meeting report

Meeting Report
Microbiome 2.0: lessons from the 2024 Gut Microbiota for Health World Summit
Sushrut Jangi & Gail Hecht
Article: 2400579
Published online: 10 Sep 2024
AbstractforMicrobiome 2.0: lessons from the 2024 Gut Microbiota for Health World Summit | Full Text | References | PDF (761 KB) | EPUB
  • 1854 Views
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Research Paper

Article
Microbiota-derived acetate is associated with functionally optimal virus-specific CD8+ T cell responses to influenza virus infection via GPR43-dependent metabolic reprogramming
Jingjing Qiu, Chunwei Shi, Yanan Zhang, Tianming Niu, Shuxian Chen, Guilian Yang, Shu Jeffrey Zhu & Chunfeng Wang
Article: 2401649
Published online: 10 Oct 2024
AbstractforMicrobiota-derived acetate is associated with functionally optimal virus-specific CD8+ T cell responses to influenza virus infection via GPR43-dependent metabolic reprogramming | Full Text | References | PDF (9.8 MB) | EPUB | Supplemental
  • 2219 Views
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Review

Review Article
Gut microbial metabolic signatures in diabetes mellitus and potential preventive and therapeutic applications
Enriqueta Garcia-Gutierrez, A. Kate O’Mahony, Reinaldo Sousa Dos Santos, Laura Marroquí & Paul D. Cotter
Article: 2401654
Published online: 18 Oct 2024
AbstractforGut microbial metabolic signatures in diabetes mellitus and potential preventive and therapeutic applications | Full Text | References | PDF (2.3 MB) | EPUB
  • 3546 Views
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Research Paper

Article
Gut microbiota mediate early life stress-induced social dysfunction and anxiety-like behaviors by impairing amino acid transport at the gut
Jiushuang Zhu, Zhuoting Zhong, Lijie Shi, Ling Huang, Chunqiao Lin, Yan He, Xiuwen Xia, Tiane Zhang, Weijun Ding & Youjun Yang
Article: 2401939
Published online: 11 Sep 2024
AbstractforGut microbiota mediate early life stress-induced social dysfunction and anxiety-like behaviors by impairing amino acid transport at the gut | Full Text | References | PDF (5.9 MB) | EPUB | Supplemental
  • 3071 Views
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Article
Molecular serotyping of diarrheagenic Escherichia coli with a MeltArray assay reveals distinct correlation between serotype and pathotype
Chen Du, Yiqun Liao, Congcong Ding, Jiayu Huang, Shujuan Zhou, Yiyan Xu, Zhaohui Yang, Xiaolu Shi, Yinghui Li, Min Jiang, Le Zuo, Minxu Li, Shengzhe Bian, Na Xiao, Liqiang Li, Ye Xu, Qinghua Hu & Qingge Li
Article: 2401944
Published online: 18 Sep 2024
AbstractforMolecular serotyping of diarrheagenic Escherichia coli with a MeltArray assay reveals distinct correlation between serotype and pathotype | Full Text | References | PDF (6.6 MB) | EPUB | Supplemental
  • 1597 Views
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Article
ADP-heptose attenuates Helicobacter pylori-induced dendritic cell activation
Theresa Neuper, Tobias Frauenlob, Hieu-Hoa Dang, Peter W. Krenn, Gernot Posselt, Christof Regl, Nikolaus Fortelny, Veronika Schäpertöns, Michael S. Unger, Gunda Üblagger, Daniel Neureiter, Iris Mühlbacher, Michael Weitzendorfer, Franz Singhartinger, Klaus Emmanuel, Christian G. Huber, Silja Wessler, Fritz Aberger & Jutta Horejs-Hoeck
Article: 2402543
Published online: 17 Sep 2024
AbstractforADP-heptose attenuates Helicobacter pylori-induced dendritic cell activation | Full Text | References | PDF (6.4 MB) | EPUB | Supplemental
  • 2384 Views
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Review

Review Article
Gut microbe–host interactions in post-COVID syndrome: a debilitating or restorative partnership?
Torsten P. M. Scheithauer, Roy C. Montijn & Arnout Mieremet
Article: 2402544
Published online: 17 Sep 2024
AbstractforGut microbe–host interactions in post-COVID syndrome: a debilitating or restorative partnership? | Full Text | References | PDF (1.7 MB) | EPUB
  • 1946 Views
  • 1 CrossRef citations
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Research Paper

Article
Prebiotic inulin controls Th17 cells mediated central nervous system autoimmunity through modulating the gut microbiota and short chain fatty acids
Ning Li, Xinyan Han, Ming Ruan, Fei Huang, Liu Yang, Tianhao Xu, Huijun Wang, Hui Wu, Songshan Shi, Yongjun Wang, Xiaojun Wu & Shunchun Wang
Article: 2402547
Published online: 17 Sep 2024
AbstractforPrebiotic inulin controls Th17 cells mediated central nervous system autoimmunity through modulating the gut microbiota and short chain fatty acids | Full Text | References | PDF (5.9 MB) | EPUB | Supplemental
  • 3118 Views
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Commentary and view

Comment
End-to-end donor screening and manufacturing controls: complementary quality-based strategies to minimize patient risk for donor-derived microbiome therapeutics
Jason Goldsmith, Sarah Tomkovich, John G. Auniņš, Barbara H. McGovern, Jennifer C. Mahoney, Brooke R. Hasson, Christopher W J McChalicher & David S. Ege
Article: 2402550
Published online: 18 Sep 2024
AbstractforEnd-to-end donor screening and manufacturing controls: complementary quality-based strategies to minimize patient risk for donor-derived microbiome therapeutics | Full Text | References | PDF (405.8 KB) | EPUB
  • 1110 Views
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Research Paper

Article
Intestinal deguelin drives resistance to acetaminophen-induced hepatotoxicity in female mice
Shenhai Gong, Yunong Zeng, Ze Wang, Yanru Li, Rong Wu, Lei Li, Hongbin Hu, Ping Qin, Zhichao Yu, Xintao Huang, Peiheng Guo, Hong Yang, Yi He, Zhibin Zhao, Weidong Xiao, Xiaoshan Zhao, Lei Gao, Shumin Cai & Zhenhua Zeng
Article: 2404138
Published online: 21 Sep 2024
AbstractforIntestinal deguelin drives resistance to acetaminophen-induced hepatotoxicity in female mice | Full Text | References | PDF (3.1 MB) | EPUB | Supplemental
  • 2320 Views
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Review

Review Article
A new perspective in intestinal microecology: lifting the veil of exercise regulation of cardiometabolic diseases
Can Gao, Jinwen Wei, Changxu Lu, Lijie Wang, Dan Dong & Mingli Sun
Article: 2404141
Published online: 21 Sep 2024
AbstractforA new perspective in intestinal microecology: lifting the veil of exercise regulation of cardiometabolic diseases | Full Text | References | PDF (6.2 MB) | EPUB
  • 1559 Views
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Research Paper

Article
Comparative analysis of the duodenojejunal microbiome with the oral and fecal microbiomes reveals its stronger association with obesity and nutrition
Emilie Steinbach, Eugeni Belda, Rohia Alili, Solia Adriouch, Charlène J. G. Dauriat, Gianfranco Donatelli, Jean-Loup Dumont, Filippo Pacini, Thierry Tuszynski, Véronique Pelloux, Flavien Jacques, Laura Creusot, Emavieve Coles, Paul Taillandier, Marta Vazquez Gomez, Davide Masi, Véronique Mateo, Sébastien André, Melissa Kordahi, Christine Rouault, Jean-Daniel Zucker, Harry Sokol, Laurent Genser, Benoit Chassaing, Tiphaine Le Roy & Karine Clément
Article: 2405547
Published online: 07 Oct 2024
AbstractforComparative analysis of the duodenojejunal microbiome with the oral and fecal microbiomes reveals its stronger association with obesity and nutrition | Full Text | References | PDF (3.4 MB) | EPUB | Supplemental
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Review

Review Article
Akkermansia in the gastrointestinal tract as a modifier of human health
Maria E. Panzetta & Raphael H. Valdivia
Article: 2406379
Published online: 21 Sep 2024
AbstractforAkkermansia in the gastrointestinal tract as a modifier of human health | Full Text | References | PDF (1,021.3 KB) | EPUB
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Research Paper

Article
Dietary fiber intake impacts gut bacterial and viral populations in a hypertensive mouse model
Laura Avellaneda-Franco, Liang Xie, Michael Nakai, Jeremy J. Barr & Francine Z. Marques
Article: 2407047
Published online: 28 Sep 2024
AbstractforDietary fiber intake impacts gut bacterial and viral populations in a hypertensive mouse model | Full Text | References | PDF (3.3 MB) | EPUB | Supplemental
  • 1986 Views
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Correction

Correction
Correction
Article: 2409026
Published online: 01 Oct 2024
CitationforCorrection | Full Text | PDF (679.1 KB) | EPUB
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Correction
Correction
Article: 2409028
Published online: 03 Oct 2024
CitationforCorrection | Full Text | PDF (171.9 KB) | EPUB
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Research Article

Article
Sex-specific post-inflammatory dysbiosis mediates chronic visceral pain in colitis
Maria J. Arzamendi, Yasaman B. Habibyan, Manon Defaye, Adam Shute, Cristiane H. Baggio, Ronald Chan, Christina Ohland, Dominique G. Bihan, Ian A. Lewis, Keith A. Sharkey, Kathy D. McCoy, Christophe Altier, Markus B. Geuking & Yasmin Nasser
Article: 2409207
Published online: 03 Oct 2024
AbstractforSex-specific post-inflammatory dysbiosis mediates chronic visceral pain in colitis | Full Text | References | PDF (3.6 MB) | EPUB | Supplemental
  • 2115 Views
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Review

Review Article
The role of microbial indole metabolites in tumor
Dingjiacheng Jia, Zheng Kuang & Liangjing Wang
Article: 2409209
Published online: 01 Oct 2024
AbstractforThe role of microbial indole metabolites in tumor | Full Text | References | PDF (4.4 MB) | EPUB
  • 4314 Views
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Research Paper

Article
Entamoeba muris mitigates metabolic consequences of high-fat diet in mice
Maryline Roy, Anne Dumay, Sandrine Adiba, Sylvana Rozes, Seiki Kobayashi, Valérie Paradis, Catherine Postic, Dominique Rainteau, Eric Ogier-Denis, Maude Le Gall, Ulrich Meinzer, Emilie Viennois, Maite Casado-Bedmar, Alexis Mosca & Jean-Pierre Hugot
Article: 2409210
Published online: 13 Oct 2024
AbstractforEntamoeba muris mitigates metabolic consequences of high-fat diet in mice | Full Text | References | PDF (3.9 MB) | EPUB | Supplemental
  • 2103 Views
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Article
Progranulin protects against Clostridioides difficile infection by enhancing IL-22 production
Jun Huang, Bichen Liu, Yi Liu, Wenxian You, Ping Zhao, Yuhan Liu, Kehan Wang, Xiaofei Lai, Banglao Xu & Ju Cao
Article: 2409220
Published online: 30 Sep 2024
AbstractforProgranulin protects against Clostridioides difficile infection by enhancing IL-22 production | Full Text | References | PDF (4.1 MB) | EPUB | Supplemental
  • 1472 Views
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Article
BPP43_05035 is a Brachyspira pilosicoli cell surface adhesin that weakens the integrity of the epithelial barrier during infection
Anandi Rajan, Pablo Gallego, Brendan Dolan, Piyush Patel, Chinmay Dwibedi, Ana S. Luis, Sergio Trillo-Muyo, Liisa Arike, Sjoerd van der Post, Magnus Simrén & Thaher Pelaseyed
Article: 2409247
Published online: 30 Sep 2024
AbstractforBPP43_05035 is a Brachyspira pilosicoli cell surface adhesin that weakens the integrity of the epithelial barrier during infection | Full Text | References | PDF (4.9 MB) | EPUB | Supplemental
  • 1209 Views
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Article
Helicobacter pylori PldA modulates TNFR1-mediated p38 signaling pathways to regulate macrophage responses for its survival
Wei Yang Sit, Mei-Ling Cheng, Tsan-Jan Chen, Chia-Jo Chen, Bo-Nian Chen, Ding-Jun Huang, Pei-Lien Chen, Yun-Ching Chen, Chi-Jen Lo, Deng-Chyang Wu, Wan-Chen Hsieh, Chung-Ting Chang, Ruey-Hwa Chen & Wen-Ching Wang
Article: 2409924
Published online: 06 Oct 2024
AbstractforHelicobacter pylori PldA modulates TNFR1-mediated p38 signaling pathways to regulate macrophage responses for its survival | Full Text | References | PDF (6.3 MB) | EPUB | Supplemental
  • 2060 Views
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Article
Synergistic activity of Enterococcus Faecium-induced ferroptosis via expansion of IFN-γ+CD8+ T cell population in advanced hepatocellular carcinoma treated with sorafenib
Haitao Yu, Ganglian Lin, Junyan Jiang, Jiangqiao Yao, Zhenyan Pan, Haonan Xie, Zhiyuan Bo, Qikuan He, Jinhuan Yang, Ziyan Chen, Jiacheng Li, Yi Wang, Zhengping Yu, Yehuda G. Assaraf & Gang Chen
Article: 2410474
Published online: 01 Oct 2024
AbstractforSynergistic activity of Enterococcus Faecium-induced ferroptosis via expansion of IFN-γ+CD8+ T cell population in advanced hepatocellular carcinoma treated with sorafenib | Full Text | References | PDF (4.1 MB) | EPUB | Supplemental
  • 2326 Views
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Article
Paclitaxel chemotherapy disrupts microbiota-enterohepatic bile acid metabolism in mice
Brett R. Loman, Zainab Alzoubi, Alexis J. Lynch, Robert M. Jaggers, Kelley Jordan, Corena V. Grant, Lynette K. Rogers, Leah M. Pyter & Michael T. Bailey
Article: 2410475
Published online: 01 Oct 2024
AbstractforPaclitaxel chemotherapy disrupts microbiota-enterohepatic bile acid metabolism in mice | Full Text | References | PDF (6.2 MB) | EPUB | Supplemental
  • 2277 Views
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Review

Review Article
Relevance of gut microbiome research in food safety assessment
Manuel Garrido-Romero, Florencio Pazos, Elisa Sánchez-Martínez, Carlos Benito, José Ángel Gómez-Ruiz, Gonzalo Borrego-Yaniz, Cameron Bowes, Hermann Broll, Alberto Caminero, Eleonora Caro, Mónica Chagoyen, Marianne Chemaly, Antonio Fernández-Dumont, Haris Gisavi, Georgia Gkrintzali, Sangeeta Khare, Abelardo Margolles, Ana Márquez, Javier Martín, Caroline Merten, Antonia Montilla, Ana Muñoz-Labrador, Jorge Novoa, Konstantinos Paraskevopoulos, Cyrielle Payen, Helen Withers, Patricia Ruas-Madiedo, Lorena Ruiz, Yolanda Sanz, Rodrigo Jiménez-Saiz & F. Javier Moreno
Article: 2410476
Published online: 03 Oct 2024
AbstractforRelevance of gut microbiome research in food safety assessment | Full Text | References | PDF (5.9 MB) | EPUB
  • 2734 Views
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Review Article
Microbiome’s role in musculoskeletal health through the gut-bone axis insights
Zhengrui Li, Qi Wang, Xufeng Huang, Yinteng Wu & Dan Shan
Article: 2410478
Published online: 10 Oct 2024
AbstractforMicrobiome’s role in musculoskeletal health through the gut-bone axis insights | Full Text | References | PDF (2.3 MB) | EPUB
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Research Paper

Article
Gut microbiota genome features associated with brain injury in extremely premature infants
David Seki, Rasmus Kirkegaard, Jay Osvatic, Bela Hausmann, Joana Séneca, Petra Pjevac, Angelika Berger, Lindsay J Hall, Lukas Wisgrill & David Berry
Article: 2410479
Published online: 07 Oct 2024
AbstractforGut microbiota genome features associated with brain injury in extremely premature infants | Full Text | References | PDF (3.4 MB) | EPUB | Supplemental
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Correction

Correction
Correction
Article: 2411134
Published online: 03 Oct 2024
CitationforCorrection | Full Text | PDF (890.8 KB) | EPUB
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Review

Review Article
Gut microbiome therapy: fecal microbiota transplantation vs live biotherapeutic products
Do-Yeon Kim, So-Yeon Lee, Jae-Yun Lee, Tae Woong Whon, June-Young Lee, Che Ok Jeon & Jin-Woo Bae
Article: 2412376
Published online: 08 Oct 2024
AbstractforGut microbiome therapy: fecal microbiota transplantation vs live biotherapeutic products | Full Text | References | PDF (3.7 MB) | EPUB
  • 2930 Views
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Research Paper

Article
High-fat diet-induced L-saccharopine accumulation inhibits estradiol synthesis and damages oocyte quality by disturbing mitochondrial homeostasis
Jingyi Wen, Yanzhi Feng, Liru Xue, Suzhen Yuan, Qian Chen, Aiyue Luo, Shixuan Wang & Jinjin Zhang
Article: 2412381
Published online: 16 Oct 2024
AbstractforHigh-fat diet-induced L-saccharopine accumulation inhibits estradiol synthesis and damages oocyte quality by disturbing mitochondrial homeostasis | Full Text | References | PDF (21.5 MB) | EPUB | Supplemental
  • 2835 Views
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Article
ChiA: a major player in the virulence of Crohn’s disease-associated adherent and invasive Escherichia coli (AIEC)
Margot Fargeas, Frederic Faure, Clara Douadi, Caroline Chevarin, Aurélien Birer, Adeline Sivignon, Michael Rodrigues, Jérémy Denizot, Elisabeth Billard, Nicolas Barnich & Anthony Buisson
Article: 2412667
Published online: 14 Oct 2024
AbstractforChiA: a major player in the virulence of Crohn’s disease-associated adherent and invasive Escherichia coli (AIEC) | Full Text | References | PDF (4.2 MB) | EPUB | Supplemental
  • 1463 Views
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Article
Clostridium sporogenes-derived metabolites protect mice against colonic inflammation
Felix F. Krause, Kira I. Mangold, Anna-Lena Ruppert, Hanna Leister, Anne Hellhund-Zingel, Aleksandra Lopez Krol, Jelena Pesek, Bernhard Watzer, Sarah Winterberg, Hartmann Raifer, Kai Binder, Ralf Kinscherf, Alesia Walker, Wolfgang A. Nockher, R. Verena Taudte, Wilhelm Bertrams, Bernd Schmeck, Anja A. Kühl, Britta Siegmund, Rossana Romero, Maik Luu, Stephan Göttig, Isabelle Bekeredjian-Ding, Ulrich Steinhoff, Burkhard Schütz & Alexander Visekruna
Article: 2412669
Published online: 14 Oct 2024
AbstractforClostridium sporogenes-derived metabolites protect mice against colonic inflammation | Full Text | References | PDF (3.7 MB) | EPUB | Supplemental
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Article
Giardia spp.-induced microbiota dysbiosis disrupts intestinal mucin glycosylation
Elena Fekete, Thibault Allain, Olivia Sosnowski, Stephanie Anderson, Ian A. Lewis & Andre G. Buret
Article: 2412676
Published online: 16 Oct 2024
AbstractforGiardia spp.-induced microbiota dysbiosis disrupts intestinal mucin glycosylation | Full Text | References | PDF (9.8 MB) | EPUB | Supplemental
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Review

Review Article
A pathophysiologic framework for the overlap of disorders of gut-brain interaction and the role of the gut microbiome
Ayesha Shah, Yeong Yeh Lee, Hidekazu Suzuki, Joash Tan-Loh, Kewin Tien Ho Siah, Kok-Ann Gwee, Thomas Fairlie, Nicholas J. Talley, Uday C Ghoshal, Yen-Po Wang, Yong Sung Kim & Gerald Holtmann
Article: 2413367
Published online: 31 Oct 2024
AbstractforA pathophysiologic framework for the overlap of disorders of gut-brain interaction and the role of the gut microbiome | Full Text | References | PDF (964.3 KB) | EPUB
  • 2907 Views
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Research Paper

Article
Inflammasome activation links enteric Salmonella Typhimurium infection to a rapid, cytokine-dependent increase in intestinal mucin release
Xiao Han, Joannie M. Allaire, Shauna M. Crowley, Jocelyn J. Chan, Kelly Lau, Conghao Zhang, Simon A. Hirota, Kirk Bergstrom, Leigh A. Knodler & Bruce A. Vallance
Article: 2413372
Published online: 20 Oct 2024
AbstractforInflammasome activation links enteric Salmonella Typhimurium infection to a rapid, cytokine-dependent increase in intestinal mucin release | Full Text | References | PDF (8 MB) | EPUB | Supplemental
  • 1992 Views
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Review

Review Article
The effects of gut microbiota on appetite regulation and the underlying mechanisms
Miao Yu, Bing Yu & Daiwen Chen
Article: 2414796
Published online: 06 Nov 2024
AbstractforThe effects of gut microbiota on appetite regulation and the underlying mechanisms | Full Text | References | PDF (2.3 MB) | EPUB
  • 2462 Views
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Review Article
The case for microbial intervention at weaning
Julia N. Flores, Jean-Bernard Lubin & Michael A. Silverman
Article: 2414798
Published online: 28 Oct 2024
AbstractforThe case for microbial intervention at weaning | Full Text | References | PDF (1.5 MB) | EPUB
  • 1465 Views
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Review Article
The role and mechanism of gut-lung axis mediated bidirectional communication in the occurrence and development of chronic obstructive pulmonary disease
Xiaofan Song, Xina Dou, Jiajing Chang, Xiaonan Zeng, Qinhong Xu & Chunlan Xu
Article: 2414805
Published online: 24 Oct 2024
AbstractforThe role and mechanism of gut-lung axis mediated bidirectional communication in the occurrence and development of chronic obstructive pulmonary disease | Full Text | References | PDF (2.5 MB) | EPUB
  • 2364 Views
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Research Paper

Article
Species- and subspecies-level characterization of health-associated bacterial consortia that colonize the human gut during infancy
Samuel S. Minot, Koshlan Mayer-Blackwell, Andrew Fiore-Gartland, Andrew Johnson, Steven Self, Parveen Bhatti, Lena Yao, Lili Liu, Xin Sun, Yi Jinfa & James Kublin
Article: 2414975
Published online: 20 Oct 2024
AbstractforSpecies- and subspecies-level characterization of health-associated bacterial consortia that colonize the human gut during infancy | Full Text | References | PDF (3.7 MB) | EPUB | Supplemental
  • 1400 Views
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Review

Review Article
A gut feeling of statin
Jianqing She, Lizhe Sun, Yue Yu, Heze Fan, Xia Li, Xinyu Zhang, Xiaozhen Zhuo, Manyun Guo, Junhui Liu, Peining Liu, Gulinigaer Tuerhongjiang, Bin Du, Hongbing Li, Jun Yu, Zuyi Yuan & Yue Wu
Article: 2415487
Published online: 29 Oct 2024
AbstractforA gut feeling of statin | Full Text | References | PDF (1.9 MB) | EPUB
  • 2156 Views
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Research Paper

Article
Normalization of short-chain fatty acid concentration by bacterial count of stool samples improves discrimination between eubiotic and dysbiotic gut microbiota caused by Clostridioides difficile infection-
Anna Sayol-Altarriba, Andrea Aira, Anna Villasante, Rosa Albarracín, Joana Faneca, Gregori Casals, José Luis Villanueva-Cañas & Climent Casals-Pascual
Article: 2415488
Published online: 12 Oct 2024
AbstractforNormalization of short-chain fatty acid concentration by bacterial count of stool samples improves discrimination between eubiotic and dysbiotic gut microbiota caused by Clostridioides difficile infection- | Full Text | References | PDF (2 MB) | EPUB | Supplemental
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Review

Review Article
Reexamining the role of Fusobacterium nucleatum subspecies in clinical and experimental studies
Madeline Krieger, Mingzhe Guo & Justin Merritt
Article: 2415490
Published online: 12 Oct 2024
AbstractforReexamining the role of Fusobacterium nucleatum subspecies in clinical and experimental studies | Full Text | References | PDF (1.7 MB) | EPUB
  • 1917 Views
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Research Paper

Article
Controlled infection with cryopreserved human hookworm induces CTLA-4 expression on Tregs and upregulates tryptophan metabolism
Francesco Vacca, Thomas C. Mules, Mali Camberis, Brittany Lavender, Sophia-Louise Noble, Alissa Cait, Kate Maclean, John Mamum, Bibek Yumnam, Tama Te Kawa, Laura Ferrer-Font, Jeffry S. Tang, Olivier Gasser, Graham Le Gros & Stephen Inns
Article: 2416517
Published online: 16 Oct 2024
AbstractforControlled infection with cryopreserved human hookworm induces CTLA-4 expression on Tregs and upregulates tryptophan metabolism | Full Text | References | PDF (2.6 MB) | EPUB | Supplemental
  • 1008 Views
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BRIEF REPORT

Brief Report
Fecal samples and rectal swabs adequately reflect the human colonic luminal microbiota
Julia Rode, Linnea Brengesjö Johnson, Julia König, Ignacio Rangel, Lars Engstrand, Dirk Repsilber & Robert J Brummer
Article: 2416912
Published online: 22 Oct 2024
AbstractforFecal samples and rectal swabs adequately reflect the human colonic luminal microbiota | Full Text | References | PDF (1.5 MB) | EPUB | Supplemental
  • 1483 Views
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Review

Review Article
Gut microbiota determines the fate of dietary fiber-targeted interventions in host health
Wenjing Wang, Zhexin Fan, Qingqing Yan, Tong Pan, Jing Luo, Yijiang Wei, Baokun Li, Zhifeng Fang & Wenwei Lu
Article: 2416915
Published online: 17 Oct 2024
AbstractforGut microbiota determines the fate of dietary fiber-targeted interventions in host health | Full Text | References | PDF (3.2 MB) | EPUB
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Research Article

Article
Candida tropicalis-derived vitamin B3 exerts protective effects against intestinal inflammation by promoting IL-17A/IL-22-dependent epithelial barrier function
Ha T Doan, Li-Chieh Cheng, Yi-Ling Chiu, Yuan-Kai Cheng, Cheng-Chih Hsu, Yee-Chun Chen, Hsiu-Jung Lo & Hao-Sen Chiang
Article: 2416922
Published online: 27 Oct 2024
AbstractforCandida tropicalis-derived vitamin B3 exerts protective effects against intestinal inflammation by promoting IL-17A/IL-22-dependent epithelial barrier function | Full Text | References | PDF (8.3 MB) | EPUB | Supplemental
  • 2899 Views
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Article
Exercise-changed gut mycobiome as a potential contributor to metabolic benefits in diabetes prevention: an integrative multi-omics study
Yao Wang, Jiarui Chen, Yueqiong Ni, Yan Liu, Xiang Gao, Michael Andrew Tse, Gianni Panagiotou & Aimin Xu
Article: 2416928
Published online: 29 Oct 2024
AbstractforExercise-changed gut mycobiome as a potential contributor to metabolic benefits in diabetes prevention: an integrative multi-omics study | Full Text | References | PDF (2.5 MB) | EPUB | Supplemental
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Research Paper

Article
Morphine-induced intestinal microbial dysbiosis drives TLR-dependent IgA targeting of gram-positive bacteria and upregulation of CD11b and TLR2 on a sub-population of IgA+ B cells
Nicolas Vitari, Salma Singh, Junyi Tao, Bridget Truitt, Udhghatri Kolli, Richa Jalodia, Kathryn M LaPorte, Yaa Abu, Danielle Antoine, Umakant Sharma & Sabita Roy
Article: 2417729
Published online: 23 Oct 2024
AbstractforMorphine-induced intestinal microbial dysbiosis drives TLR-dependent IgA targeting of gram-positive bacteria and upregulation of CD11b and TLR2 on a sub-population of IgA+ B cells | Full Text | References | PDF (4.7 MB) | EPUB | Supplemental
  • 1306 Views
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Review

Review Article
Muropeptides and muropeptide transporters impact on host immune response
Maria Lucia Orsini Delgado, Joao Gamelas Magalhaes, Rachel Morra & Antonietta Cultrone
Article: 2418412
Published online: 22 Oct 2024
AbstractforMuropeptides and muropeptide transporters impact on host immune response | Full Text | References | PDF (2.3 MB) | EPUB
  • 1525 Views
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Research Article

Article
Lactobacillaceae differentially impact butyrate-producing gut microbiota to drive CNS autoimmunity
Theresa L. Montgomery, Lucinda C. Toppen, Korin Eckstrom, Eamonn R. Heney, Josephine J. Kennedy, Matthew J. Scarborough & Dimitry N. Krementsov
Article: 2418415
Published online: 27 Oct 2024
AbstractforLactobacillaceae differentially impact butyrate-producing gut microbiota to drive CNS autoimmunity | Full Text | References | PDF (6 MB) | EPUB | Supplemental
  • 2786 Views
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Correction

Correction
Correction
Article: 2418774
Published online: 25 Oct 2024
CitationforCorrection | Full Text | PDF (1.4 MB) | EPUB
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Research Article

Article
Fecal microbial marker panel for aiding diagnosis of autism spectrum disorders
Yating Wan, Oscar W.H. Wong, Hein M Tun, Qi Su, Zhilu Xu, Whitney Tang, Suk Ling Ma, Sandra Chan, Francis K L Chan & Siew C Ng
Article: 2418984
Published online: 28 Oct 2024
AbstractforFecal microbial marker panel for aiding diagnosis of autism spectrum disorders | Full Text | References | PDF (1.6 MB) | EPUB | Supplemental
  • 2039 Views
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Review

Review Article
More than just a number: the gut microbiota and brain function across the extremes of life
Nathan D. Nuzum, Clara Deady, Sarah Kittel-Schneider, John F. Cryan, Siobhain M. O'Mahony & Gerard Clarke
Article: 2418988
Published online: 20 Nov 2024
AbstractforMore than just a number: the gut microbiota and brain function across the extremes of life | Full Text | References | PDF (1.9 MB) | EPUB
  • 3519 Views
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Research Article

Article
Regulatory mechanism of cysteine-dependent methionine biosynthesis in Bifidobacterium longum: insights into sulfur metabolism in gut microbiota
You-Tae Kim, Joon-Gi Kwon, Daniel J. O’Sullivan & Ju-Hoon Lee
Article: 2419565
Published online: 28 Oct 2024
AbstractforRegulatory mechanism of cysteine-dependent methionine biosynthesis in Bifidobacterium longum: insights into sulfur metabolism in gut microbiota | Full Text | References | PDF (7.1 MB) | EPUB | Supplemental
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Research Paper

Article
PPARα exacerbates Salmonella Typhimurium infection by modulating the immunometabolism and macrophage polarization
Jessica R. Taddeo, Naomi Wilson, Anita Kowal, Joris Beld, Andres Klein-Szanto, Çagla Tükel & Vincent C. Tam
Article: 2419567
Published online: 07 Nov 2024
AbstractforPPARα exacerbates Salmonella Typhimurium infection by modulating the immunometabolism and macrophage polarization | Full Text | References | PDF (8.6 MB) | EPUB | Supplemental
  • 1426 Views
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Review

Review Article
How important are fatty acids in human health and can they be used in treating diseases?
Leon M. T. Dicks
Article: 2420765
Published online: 27 Oct 2024
AbstractforHow important are fatty acids in human health and can they be used in treating diseases? | Full Text | References | PDF (3 MB) | EPUB
  • 3497 Views
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Research Paper

Article
Symbiotic probiotic communities with multiple targets successfully combat obesity in high-fat-diet-fed mice
Dingming Guo, Yun Deng, Qianqian Yang, Min Li, Xiangfeng Wang, Xuchun Wan, Junqing He, Ying Xu, Wenxin Huang, Guohua Lin, Ya Xu, Yi Sun, Ruilin Zhang, Wei-Hua Chen & Zhi Liu
Article: 2420771
Published online: 03 Nov 2024
AbstractforSymbiotic probiotic communities with multiple targets successfully combat obesity in high-fat-diet-fed mice | Full Text | References | PDF (5.3 MB) | EPUB | Supplemental
  • 3007 Views
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Correction

Correction
Correction
Article: 2421106
Published online: 28 Oct 2024
CitationforCorrection | Full Text | PDF (1.7 MB) | EPUB
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Research Paper

Article
Transfer of microbiota from lean donors in combination with prebiotics prevents excessive weight gain and improves gut-brain vagal signaling in obese rats
Dulce M. Minaya, Jiyoung S Kim, Rebecca Kirkland, Jillian Allen, Sitara Cullinan, Neil Maclang, Guillaume de Lartigue & Claire de La Serre
Article: 2421581
Published online: 01 Nov 2024
AbstractforTransfer of microbiota from lean donors in combination with prebiotics prevents excessive weight gain and improves gut-brain vagal signaling in obese rats | Full Text | References | PDF (10.1 MB) | EPUB | Supplemental
  • 1834 Views
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Article
Giardia antagonizes beneficial functions of indigenous and therapeutic intestinal bacteria during protein deficiency
Aadra P. Bhatt, Jason W. Arnold, Muyiwa Awoniyi, Shan Sun, Verônica Feijoli Santiago, Deniz Coskuner, Pedro Henrique Quintela, Kenneth Walsh, Jamie Xiao, Renay Ngobeni-Nyambi, Brenna Hansen, Ajay S. Gulati, Ian M. Carroll, M. Andrea Azcarate-Peril, Anthony A. Fodor, Jonathan Swann & Luther A. Bartelt
Article: 2421623
Published online: 05 Nov 2024
AbstractforGiardia antagonizes beneficial functions of indigenous and therapeutic intestinal bacteria during protein deficiency | Full Text | References | PDF (3 MB) | EPUB | Supplemental
  • 1754 Views
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Review

Review Article
Reverse engineering the Gut-Brain Axis and microbiome-metabolomics for symbiotic/pathogenic balance in neurodegenerative diseases
Muhammad Usman Munir, Syed Aoun Ali, Ka Hang Karen Chung, Aleksandr Kakinen, Ibrahim Javed & Thomas Paul Davis
Article: 2422468
Published online: 10 Nov 2024
AbstractforReverse engineering the Gut-Brain Axis and microbiome-metabolomics for symbiotic/pathogenic balance in neurodegenerative diseases | Full Text | References | PDF (6.8 MB) | EPUB
  • 2276 Views
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Review Article
Intestinal flora: a potential pathogenesis mechanism and treatment strategy for type 1 diabetes mellitus
Shengnan Huang, Fangfang Li, Chunhua Quan & Dan Jin
Article: 2423024
Published online: 09 Nov 2024
AbstractforIntestinal flora: a potential pathogenesis mechanism and treatment strategy for type 1 diabetes mellitus | Full Text | References | PDF (1.4 MB) | EPUB
  • 1769 Views
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Review Article
Faecal (or intestinal) microbiota transplant: a tool for repairing the gut microbiome
Rohma Ghani, Despoina Chrysostomou, Lauren A Roberts, Madhumitha Pandiaraja, Julian R. Marchesi & Benjamin H. Mullish
Article: 2423026
Published online: 05 Nov 2024
AbstractforFaecal (or intestinal) microbiota transplant: a tool for repairing the gut microbiome | Full Text | References | PDF (4.2 MB) | EPUB | Supplemental
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Research Article

Article
Oral administration of Lactobacillus casei DG® after ileostomy closure in restorative proctocolectomy: a randomized placebo-controlled trial (microbiota and immune microenvironment in pouchitis -MEP1)
Imerio Angriman, Melania Scarpa, Edoardo Savarino, Ilaria Patuzzi, Alessandra Rigo, Andromachi Kotsafti, Astghik Stepanyan, Elisa Sciuto, Francesco Celotto, Silvia Negro, Antonino Caruso, Cesare Ruffolo, Romeo Bardini, Salvatore Pucciarelli, Brigida Barberio, Gaya Spolverato, Fabiana Zingone, Renata D’Incà, Ignazio Castagliuolo & Marco Scarpa
Article: 2423037
Published online: 01 Nov 2024
AbstractforOral administration of Lactobacillus casei DG® after ileostomy closure in restorative proctocolectomy: a randomized placebo-controlled trial (microbiota and immune microenvironment in pouchitis -MEP1) | Full Text | References | PDF (3.8 MB) | EPUB | Supplemental
  • 1565 Views
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Research Paper

Article
B. vulgatus ameliorates high-fat diet-induced obesity through modulating intestinal serotonin synthesis and lipid absorption in mice
Xinxin Wen, Xiaoyan Feng, Fang Xin, Rui An, Huanwei Huang, Liyuan Mao, Ping Liu, Jin Zhang, Haixia Huang, Xicheng Liu & Wei Wang
Article: 2423040
Published online: 21 Nov 2024
AbstractforB. vulgatus ameliorates high-fat diet-induced obesity through modulating intestinal serotonin synthesis and lipid absorption in mice | Full Text | References | PDF (8.3 MB) | EPUB | Supplemental
  • 3626 Views
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Article
KRAS mutations promote the intratumoral colonization of enterotoxigenic bacteroides fragilis in colorectal cancer through the regulation of the miRNA3655/SURF6/IRF7/IFNβ axis
Yizhen Chen, Shaolin Liu, Song Tan, Yuanyuan Zheng, Yifan Chen, Changshun Yang, Shengtao Lin, Yulong Mi & Weihua Li
Article: 2423043
Published online: 10 Nov 2024
AbstractforKRAS mutations promote the intratumoral colonization of enterotoxigenic bacteroides fragilis in colorectal cancer through the regulation of the miRNA3655/SURF6/IRF7/IFNβ axis | Full Text | References | PDF (17.8 MB) | EPUB | Supplemental
  • 2046 Views
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Research Letter

Research Letter
Impaired postprandial GLP-2 response enhances endotoxemia, systemic inflammation, and kidney injury in metabolic dysfunction-associated steatohepatitis (MASH): effect of phospholipid curcumin meriva
Giovanni Musso, Mella Alberto, Filippo Mariano, Maurizio Cassader, Franco De Michieli, Antonella Riva, Giovanna Petrangolini, Stefano Togni, Silvia Pinach & Roberto Gambino
Article: 2424907
Published online: 02 Dec 2024
AbstractforImpaired postprandial GLP-2 response enhances endotoxemia, systemic inflammation, and kidney injury in metabolic dysfunction-associated steatohepatitis (MASH): effect of phospholipid curcumin meriva | Full Text | References | PDF (1.4 MB) | EPUB | Supplemental
  • 1859 Views
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Research Paper

Article
Clostridium innocuum, an opportunistic gut pathogen, inactivates host gut progesterone and arrests ovarian follicular development
Mei-Jou Chen, Chia-Hung Chou, Tsun-Hsien Hsiao, Tien-Yu Wu, Chi-Ying Li, Yi-Lung Chen, Kuang-Han Chao, Tzong-Huei Lee, Ronnie G. Gicana, Chao-Jen Shih, Guo-Jie Brandon-Mong, Yi-Li Lai, Po-Ting Li, Yu-Lin Tseng, Po-Hsiang Wang & Yin-Ru Chiang
Article: 2424911
Published online: 07 Nov 2024
AbstractforClostridium innocuum, an opportunistic gut pathogen, inactivates host gut progesterone and arrests ovarian follicular development | Full Text | References | PDF (3.8 MB) | EPUB | Supplemental
  • 2153 Views
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Article
Differential contributions of the gut microbiota and metabolome to pathomechanisms in ulcerative colitis: an in vitro analysis
Jonas Poppe, Leen Boesmans, Sara Vieira-Silva, Lise Deroover, Raul Tito, Doris Vandeputte, Greet Vandermeulen, Vicky De Preter, Jeroen Raes, Severine Vermeire, Gwen Falony & Kristin Verbeke
Article: 2424913
Published online: 13 Nov 2024
AbstractforDifferential contributions of the gut microbiota and metabolome to pathomechanisms in ulcerative colitis: an in vitro analysis | Full Text | References | PDF (4.2 MB) | EPUB | Supplemental
  • 2604 Views
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Review

Review Article
Colonization resistance: the role of gut microbiota in preventing Salmonella invasion and infection
Lei Deng & Shaohui Wang
Article: 2424914
Published online: 08 Nov 2024
AbstractforColonization resistance: the role of gut microbiota in preventing Salmonella invasion and infection | Full Text | References | PDF (3.8 MB) | EPUB
  • 2356 Views
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Research Paper

Article
Immunogenicity and cross-protective efficacy induced by delayed attenuated Salmonella with regulated length of lipopolysaccharide in mice
Xiaoping Bian, Qing Liu, Yaolin Chen, Wenjin Zhang, Mengru Li, Xiaofen Zhang, Liu Yang, Yonghong Liao & Qingke Kong
Article: 2424983
Published online: 11 Nov 2024
AbstractforImmunogenicity and cross-protective efficacy induced by delayed attenuated Salmonella with regulated length of lipopolysaccharide in mice | Full Text | References | PDF (9.8 MB) | EPUB | Supplemental
  • 899 Views
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Brief Report

Brief Report
Induction of intercrypt goblet cells upon bacterial infection: a promising therapeutic target to restore the mucosal barrier
Renaud Léonard, Ewa Pasquereau-Kotula, Edwige Madec, Benjamin Marsac, Adriana Mihalache, Laurence du Merle, Jordan Denis, Corentin Spriet, Philippe Sansonetti, Shaynoor Dramsi & Catherine Robbe Masselot
Article: 2426609
Published online: 14 Nov 2024
AbstractforInduction of intercrypt goblet cells upon bacterial infection: a promising therapeutic target to restore the mucosal barrier | Full Text | References | PDF (5 MB) | EPUB | Supplemental
  • 1169 Views
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Research Paper

Article
Gut microbial metabolism of bile acids modifies the effect of Mediterranean diet interventions on cardiometabolic risk in a randomized controlled trial
Peipei Gao, Ehud Rinott, Danyue Dong, Zhendong Mei, Fenglei Wang, Yuxi Liu, Omer Kamer, Anat Yaskolka Meir, Kieran M. Tuohy, Matthias Blüher, Michael Stumvoll, Meir J. Stampfer, Iris Shai & Dong D. Wang
Article: 2426610
Published online: 13 Nov 2024
AbstractforGut microbial metabolism of bile acids modifies the effect of Mediterranean diet interventions on cardiometabolic risk in a randomized controlled trial | Full Text | References | PDF (6.3 MB) | EPUB | Supplemental
  • 3040 Views
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Review

Review Article
Mechanisms of gut bacterial metabolism of dietary polyphenols into bioactive compounds
Sara Alqudah & Jan Claesen
Article: 2426614
Published online: 14 Nov 2024
AbstractforMechanisms of gut bacterial metabolism of dietary polyphenols into bioactive compounds | Full Text | References | PDF (2.5 MB) | EPUB
  • 1837 Views
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Commentary and views

Comment
Adhesin RadD: the secret weapon of Fusobacterium nucleatum
Dingjiacheng Jia & Shujie Chen
Article: 2426617
Published online: 09 Nov 2024
AbstractforAdhesin RadD: the secret weapon of Fusobacterium nucleatum | Full Text | References | PDF (2.3 MB) | EPUB
  • 1196 Views
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Research Paper/Report

Article
Impact of an intranasal L-DBF vaccine on the gut microbiota in young and elderly mice
Ti Lu, Aaron C. Ericsson, Zackary K. Dietz, Alexa K. Cato, Lyndon M. Coghill, William D. Picking & Wendy L. Picking
Article: 2426619
Published online: 09 Nov 2024
AbstractforImpact of an intranasal L-DBF vaccine on the gut microbiota in young and elderly mice | Full Text | References | PDF (2.9 MB) | EPUB | Supplemental
  • 961 Views
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Research Paper

Article
Biosynthetic potential of the gut microbiome in longevous populations
Sheng Liu, Zhao Zhang, Xudong Wang, Yan Ma, Hengfang Ruan, Xing Wu, Baoxia Li, Xiangyu Mou, Tao Chen, Zhengqi Lu & Wenjing Zhao
Article: 2426623
Published online: 11 Nov 2024
AbstractforBiosynthetic potential of the gut microbiome in longevous populations | Full Text | References | PDF (13 MB) | EPUB | Supplemental
  • 1628 Views
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Review

Review Article
Lactic acid bacteria derived extracellular vesicles: emerging bioactive nanoparticles in modulating host health
Mohan Li, Bingyong Mao, Xin Tang, Qiuxiang Zhang, Jianxin Zhao, Wei Chen & Shumao Cui
Article: 2427311
Published online: 13 Nov 2024
AbstractforLactic acid bacteria derived extracellular vesicles: emerging bioactive nanoparticles in modulating host health | Full Text | References | PDF (2.9 MB) | EPUB | Supplemental
  • 3337 Views
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Review Article
Effects of gastric bypass bariatric surgery on gut microbiota in patients with morbid obesity
Urja Amin, Dora Huang, Arun Dhir, Anya E Shindler, Ashley E Franks & Colleen J Thomas
Article: 2427312
Published online: 17 Nov 2024
AbstractforEffects of gastric bypass bariatric surgery on gut microbiota in patients with morbid obesity | Full Text | References | PDF (6.2 MB) | EPUB
  • 1470 Views
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Research Paper

Article
Stability in fecal metabolites amid a diverse gut microbiome composition: a one-month longitudinal study of variability in healthy individuals
Matteo Sangermani, Indri Desiati, Solveig M. Jørgensen, Jia V. Li, Trygve Andreassen, Tone F. Bathen & Guro F. Giskeødegård
Article: 2427878
Published online: 12 Nov 2024
AbstractforStability in fecal metabolites amid a diverse gut microbiome composition: a one-month longitudinal study of variability in healthy individuals | Full Text | References | PDF (2.8 MB) | EPUB | Supplemental
  • 1501 Views
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Article
Rotavirus rewires host cell metabolic pathways toward glutamine catabolism for effective virus infection
Suvrotoa Mitra, Ratul Datta Chaudhuri, Rakesh Sarkar, Shreya Banerjee, Arpita Mukherjee, Ranjana Sharma, Animesh Gope, Kei Kitahara, Shin-Ichi Miyoshi & Mamta Chawla-Sarkar
Article: 2428425
Published online: 20 Nov 2024
AbstractforRotavirus rewires host cell metabolic pathways toward glutamine catabolism for effective virus infection | Full Text | References | PDF (7.7 MB) | EPUB | Supplemental
  • 1358 Views
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Meeting report

Meeting Report
Prebiotics in food and dietary supplements: a roadmap to EU health claims
Kieran Tuohy, Elaine E. Vaughan, Lucien F. Harthoorn, Ellen E. Blaak, Philip W. J. Burnet, Alessandro Busetti, Anirikh Chakrabarti, Nathalie Delzenne, Paul de Vos, Louise Dye, Damien Guillemet, Lesley A. Houghton, Alwine F. M. Kardinaal, Cath Mersh, Kathy Musa-Veloso, Annegret Nielsen, Justyna Palasinska, Seppo Salminen, Gemma Walton, Naomi Venlet, Charlotte Hubermont & Philip C. Calder
Article: 2428848
Published online: 15 Nov 2024
AbstractforPrebiotics in food and dietary supplements: a roadmap to EU health claims | Full Text | References | PDF (1 MB) | EPUB
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Research Paper

Article
Defective Atg16l1 in intestinal epithelial cells links to altered fecal microbiota and metabolic shifts during pregnancy in mice
Víctor A. López-Agudelo, Maren Falk-Paulsen, Richa Bharti, Ateequr Rehman, Felix Sommer, Eike Matthias Wacker, David Ellinghaus, Anne Luzius, Laura Katharina Sievers, Manuel Liebeke, Arthur Kaser & Philip Rosenstiel
Article: 2429267
Published online: 02 Dec 2024
AbstractforDefective Atg16l1 in intestinal epithelial cells links to altered fecal microbiota and metabolic shifts during pregnancy in mice | Full Text | References | PDF (7.4 MB) | EPUB | Supplemental
  • 1958 Views
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Article
Dysrupted microbial tryptophan metabolism associates with SARS-CoV-2 acute inflammatory responses and long COVID
Lu Yao, Hannah Devotta, Junhui Li, Nonhlanhla Lunjani, Corinna Sadlier, Aonghus Lavelle, Werner C. Albrich, Jens Walter, Paul W. O’Toole & Liam O’Mahony
Article: 2429754
Published online: 17 Nov 2024
AbstractforDysrupted microbial tryptophan metabolism associates with SARS-CoV-2 acute inflammatory responses and long COVID | Full Text | References | PDF (4.3 MB) | EPUB | Supplemental
  • 3747 Views
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Review

Review Article
Human milk oligosaccharides combine with Bifidobacterium longum to form the “golden shield” of the infant intestine: metabolic strategies, health effects, and mechanisms of action
Shuo Yang, Junwu Cai, Qian Su, Qiaohui Li & Xiangchen Meng
Article: 2430418
Published online: 21 Nov 2024
AbstractforHuman milk oligosaccharides combine with Bifidobacterium longum to form the “golden shield” of the infant intestine: metabolic strategies, health effects, and mechanisms of action | Full Text | References | PDF (3.8 MB) | EPUB
  • 1694 Views
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Review Article
Structure-dependent stimulation of gut bacteria by arabinoxylo-oligosaccharides (AXOS): a review
Kai P. Leschonski, Martin S. Mortensen, Lea B.S. Hansen, Kristian B.R.M. Krogh, Mirjam A. Kabel & Martin F. Laursen
Article: 2430419
Published online: 29 Nov 2024
AbstractforStructure-dependent stimulation of gut bacteria by arabinoxylo-oligosaccharides (AXOS): a review | Full Text | References | PDF (2.1 MB) | EPUB | Supplemental
  • 2418 Views
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Review Article
Unraveling the gut-skin axis in atopic dermatitis: exploiting insights for therapeutic strategies
Marcela Rios-Carlos, Daniel Cervantes-García, Laura E. Córdova-Dávalos, Luis G. Bermúdez-Humarán & Eva Salinas
Article: 2430420
Published online: 27 Nov 2024
AbstractforUnraveling the gut-skin axis in atopic dermatitis: exploiting insights for therapeutic strategies | Full Text | References | PDF (2 MB) | EPUB
  • 2916 Views
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Research Paper

Article
IL-17 signaling protects against Helicobacter pylori-induced gastric cancer
Lee C. Brackman, Matthew S. Jung, Emily H. Green, Nikhita Joshi, Frank L. Revetta, Mark S. McClain, Nicholas O. Markham, M. Blanca Piazuelo & Holly M. Algood
Article: 2430421
Published online: 26 Nov 2024
AbstractforIL-17 signaling protects against Helicobacter pylori-induced gastric cancer | Full Text | References | PDF (11 MB) | EPUB | Supplemental
  • 1984 Views
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Review

Review Article
Microbiota-derived small molecule genotoxins: host interactions and ecological impact in the gut ecosystem
Ellen L. Zechner & Sabine Kienesberger
Article: 2430423
Published online: 18 Nov 2024
AbstractforMicrobiota-derived small molecule genotoxins: host interactions and ecological impact in the gut ecosystem | Full Text | References | PDF (4.6 MB) | EPUB
  • 1726 Views
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Research Paper

Article
Butyrate reduces epithelial barrier dysfunction induced by the foodborne mycotoxin deoxynivalenol in cell monolayers derived from pig jejunum organoids
Julie Alberge, Eloïse Mussard, Carine Al-Ayoubi, Corinne Lencina, Christelle Marrauld, Laurent Cauquil, Caroline S. Achard, Ivan Mateos, Imourana Alassane-Kpembi, Isabelle P. Oswald, Laura Soler, Sylvie Combes & Martin Beaumont
Article: 2430424
Published online: 21 Nov 2024
AbstractforButyrate reduces epithelial barrier dysfunction induced by the foodborne mycotoxin deoxynivalenol in cell monolayers derived from pig jejunum organoids | Full Text | References | PDF (8.1 MB) | EPUB | Supplemental
  • 1950 Views
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Article
Infant feces-derived Lactobacillus gasseri FWJL-4 mitigates experimental necrotizing enterocolitis via acetate production
Li-Long Pan, Yudong Sun, Xiaoliang Dong, Zhengnan Ren, Binbin Li, Ping Yang, Le Zhang & Jia Sun
Article: 2430541
Published online: 08 Dec 2024
AbstractforInfant feces-derived Lactobacillus gasseri FWJL-4 mitigates experimental necrotizing enterocolitis via acetate production | Full Text | References | PDF (8.8 MB) | EPUB | Supplemental
  • 4466 Views
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Article
Transcriptional profiling of zebrafish intestines identifies macrophages as host cells for human norovirus infection
Emma Roux, Reegan J. Willms, Jana Van Dycke, Álvaro Cortes Calabuig, Lore Van Espen, Geert Schoofs, Jelle Matthijnssens, Johan Neyts, Peter de Witte, Edan Foley & Joana Rocha-Pereira
Article: 2431167
Published online: 25 Nov 2024
AbstractforTranscriptional profiling of zebrafish intestines identifies macrophages as host cells for human norovirus infection | Full Text | References | PDF (3 MB) | EPUB | Supplemental
  • 1915 Views
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Review

Review Article
Probiotic significance of Lactobacillus strains: a comprehensive review on health impacts, research gaps, and future prospects
Abdul Bari Shah, Aizhamal Baiseitova, Muhammad Zahoor, Ishaq Ahmad, Muhammad Ikram, Allah Bakhsh, Murad Ali Shah, Imdad Ali, Muhammad Idress, Riaz Ullah, Fahd A. Nasr & Mohammed Al-Zharani
Article: 2431643
Published online: 24 Nov 2024
AbstractforProbiotic significance of Lactobacillus strains: a comprehensive review on health impacts, research gaps, and future prospects | Full Text | References | PDF (1.5 MB) | EPUB
  • 4565 Views
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Research Paper

Article
Bacteroides thetaiotaomicron enhances H2S production in Bilophila wadsworthia
Jade Davies, Melinda J. Mayer, Nathalie Juge, Arjan Narbad & Lizbeth Sayavedra
Article: 2431644
Published online: 28 Nov 2024
AbstractforBacteroides thetaiotaomicron enhances H2S production in Bilophila wadsworthia | Full Text | References | PDF (3 MB) | EPUB | Supplemental
  • 2000 Views
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Article
Comparison of Crohn’s disease-associated adherent-invasive Escherichia coli (AIEC) from France and Hong Kong: results from the Pacific study
Caroline Chevarin, Zhilu Xu, Lucas Martin, Frederic Robin, Racha Beyrouthy, Jean-Frédéric Colombel, Alexander Sulakvelidze, Siew C Ng, Richard Bonnet, Anthony Buisson & Nicolas Barnich
Article: 2431645
Published online: 25 Nov 2024
AbstractforComparison of Crohn’s disease-associated adherent-invasive Escherichia coli (AIEC) from France and Hong Kong: results from the Pacific study | Full Text | References | PDF (3.8 MB) | EPUB | Supplemental
  • 1283 Views
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Article
Abnormalities in gut virome signatures linked with cognitive impairment in older adults
Adewale S. James, Noorul A. Adil, Dayna Goltz, Divyani Tangudu, Diptaraj S. Chaudhari, Rohit Shukla, Vivek Kumar, Ambuj Kumar, Michal M. Masternak, Peter Holland, Corinne Labyak, Adam Golden, Mariana Dangiolo, Andrea Y. Arikawa, Judyta Kociolek, Amoy Fraser, Cynthia Williams, Marc Agronin, Mariolga Aymat, Shalini Jain & Hariom Yadav
Article: 2431648
Published online: 16 Dec 2024
AbstractforAbnormalities in gut virome signatures linked with cognitive impairment in older adults | Full Text | References | PDF (4.9 MB) | EPUB | Supplemental
  • 1901 Views
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Article
Cerebrovascular damage caused by the gut microbe/host co-metabolite p-cresol sulfate is prevented by blockade of the EGF receptor
Sita N. Shah, Tobias B-A. Knausenberger, Matthew G. Pontifex, Emily Connell, Gwénaëlle Le Gall, Tom A.J. Hardy, David W. Randall, Kieran McCafferty, Muhammad M. Yaqoob, Egle Solito, Michael Müller, Andrew V. Stachulski, Robert C. Glen, David Vauzour, Lesley Hoyles & Simon McArthur
Article: 2431651
Published online: 24 Nov 2024
AbstractforCerebrovascular damage caused by the gut microbe/host co-metabolite p-cresol sulfate is prevented by blockade of the EGF receptor | Full Text | References | PDF (4.3 MB) | EPUB | Supplemental
  • 2276 Views
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Article
miMatch: a microbial metabolic background matching tool for mitigating host confounding in metagenomics research
Lei Liu, Suqi Cao, Weili Lin, Zhigang Gao, Liu Yang, Lixin Zhu, Bin Yang, Guoqing Zhang, Ruixin Zhu & Dingfeng Wu
Article: 2434029
Published online: 27 Nov 2024
AbstractformiMatch: a microbial metabolic background matching tool for mitigating host confounding in metagenomics research | Full Text | References | PDF (3.4 MB) | EPUB | Supplemental
  • 1441 Views
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Article
Omic characterizing and targeting gut dysbiosis in children with autism spectrum disorder: symptom alleviation through combined probiotic and medium-carbohydrate diet intervention - a pilot study
Yalin Li, Weiwei Hu, Bing Lin, Teng Ma, Zhentian Zhang, Weiqian Hu, Rui Zhou, Lai-Yu Kwok, Zhihong Sun, Cuifeng Zhu & Heping Zhang
Article: 2434675
Published online: 04 Dec 2024
AbstractforOmic characterizing and targeting gut dysbiosis in children with autism spectrum disorder: symptom alleviation through combined probiotic and medium-carbohydrate diet intervention - a pilot study | Full Text | References | PDF (4 MB) | EPUB
  • 2634 Views
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Article
Dietary inulin ameliorates obesity-induced severe acute pancreatitis via gut-pancreas axis
Xin Li, Pan Zheng, Yaoyu Zou, Langyi Guan, Nianshuang Li, Jianping Liu, Nonghua Lu, Yin Zhu & Cong He
Article: 2436949
Published online: 09 Dec 2024
AbstractforDietary inulin ameliorates obesity-induced severe acute pancreatitis via gut-pancreas axis | Full Text | References | PDF (6.5 MB) | EPUB | Supplemental
  • 2750 Views
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Article
Alterations of gut virome with close interaction in the progression of estrogen deficiency-induced osteoporosis
Yueqi Chen, Chuan Yang, Zihan Deng, Tingwen Xiang, Jiulin Tan, Jianzhong Xu, Dong Sun & Fei Luo
Article: 2437250
Published online: 09 Dec 2024
AbstractforAlterations of gut virome with close interaction in the progression of estrogen deficiency-induced osteoporosis | Full Text | References | PDF (26.5 MB) | EPUB | Supplemental
  • 1217 Views
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Article
Gut microbiota CLA and IL-35 induction in macrophages through Gαq/11-mediated STAT1/4 pathway: an animal-based study
Xiaomin Su, Yazheng Yang, Yunhuan Gao, Juanjuan Wang, Yang Hao, Yuan Zhang & Rongcun Yang
Article: 2437253
Published online: 05 Dec 2024
AbstractforGut microbiota CLA and IL-35 induction in macrophages through Gαq/11-mediated STAT1/4 pathway: an animal-based study | Full Text | References | PDF (7.1 MB) | EPUB | Supplemental
  • 1434 Views
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Article
Unexpected vulnerability of Enterococcus faecium to polymyxin B under anaerobic condition
Yongjun Son, Bitnara Kim, Pureun Kim, Jihyeon Min, Yerim Park, Jihye Yang, Wonjae Kim, Masanori Toyofuku & Woojun Park
Article: 2438465
Published online: 11 Dec 2024
AbstractforUnexpected vulnerability of Enterococcus faecium to polymyxin B under anaerobic condition | Full Text | References | PDF (4.2 MB) | EPUB | Supplemental
  • 963 Views
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Article
Hypusination in intestinal epithelial cells protects mice from infectious colitis
Alain P. Gobert, Caroline V. Hawkins, Kamery J. Williams, Lydia A. Snyder, Daniel P. Barry, Mohammad Asim, Margaret M. Allaman, Kara M. McNamara, Alberto G. Delgado, Yu Wang, Shilin Zhao, Kristie L. Rose, M. Blanca Piazuelo & Keith T. Wilson
Article: 2438828
Published online: 14 Dec 2024
AbstractforHypusination in intestinal epithelial cells protects mice from infectious colitis | Full Text | References | PDF (4.8 MB) | EPUB | Supplemental
  • 1364 Views
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Article
The microbiota metabolite, phloroglucinol, confers long-term protection against inflammation
Janire Castelo, Sarai Araujo-Aris, Diego Barriales, Samuel Tanner Pasco, Iratxe Seoane, Ainize Peña-Cearra, Ainhoa Palacios, Carolina Simó, Virginia Garcia-Cañas, Muthita Khamwong, Itziar Martín-Ruiz, Monika Gonzalez-Lopez, Laura Barcena, José Ezequiel Martín Rodríguez, José Luís Lavín, Naiara Gutiez, Raquel Marcos, Estibaliz Atondo, Arantza Cobela, Laura Plaza-Vinuesa, Adrián Plata, Eneko Santos-Fernandez, Alberto Fernandez-Tejada, Mari Carmen Villarán, José Miguel Mancheño, Juana Maria Flores, Ana María Aransay, Aize Pellón, Blanca de las Rivas, Rosario Muñoz, Abelardo Margolles, Patricia Ruas-Madiedo, Maria Victoria Selma, Mercedes Gomez de Agüero, Leticia Abecia, Juan Anguita & Héctor Rodríguez
Article: 2438829
Published online: 15 Dec 2024
AbstractforThe microbiota metabolite, phloroglucinol, confers long-term protection against inflammation | Full Text | References | PDF (7.9 MB) | EPUB | Supplemental
  • 2048 Views
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Article
Dietary modulation of gut microbiota affects susceptibility to drug-induced liver injury
Han Pan, Delei Song, Zhiyi Wang, Xin Yang, Pei Luo, Wei Li, Yan Li, Mengxue Gong & Chenhong Zhang
Article: 2439534
Published online: 14 Dec 2024
AbstractforDietary modulation of gut microbiota affects susceptibility to drug-induced liver injury | Full Text | References | PDF (6.1 MB) | EPUB | Supplemental
  • 2108 Views
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Review

Review Article
The mycobiome as integral part of the gut microbiome: crucial role of symbiotic fungi in health and disease
Hui Huang, Qiurong Wang, Ying Yang, Wei Zhong, Feng He & Jun Li
Article: 2440111
Published online: 15 Dec 2024
AbstractforThe mycobiome as integral part of the gut microbiome: crucial role of symbiotic fungi in health and disease | Full Text | References | PDF (2.1 MB) | EPUB
  • 1210 Views
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Review Article
Role of gut microbes in acute lung injury/acute respiratory distress syndrome
Zixuan Ren, Zhihuan Zheng & Xiujing Feng
Article: 2440125
Published online: 10 Dec 2024
AbstractforRole of gut microbes in acute lung injury/acute respiratory distress syndrome | Full Text | References | PDF (1.1 MB) | EPUB
  • 1855 Views
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