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Articles

Parallelization of a regionalization heuristic in distributed computing platforms – a case study of parallel-p-compact-regions problem

, , &
Pages 536-555
Received 20 Nov 2013
Accepted 02 Nov 2014
Published online: 06 May 2015
 

In this paper, we report efforts to develop a parallel implementation of the p-compact regionalization problem suitable for multi-core desktop and high-performance computing environments. Regionalization for data aggregation is a key component of many spatial analytical workflows that are known to be NP-Hard. We utilize a low communication cost parallel implementation technique that provides a benchmark for more complex implementations of this algorithm. Both the initialization phase, utilizing a Memory-based Randomized Greedy and Edge Reassignment (MERGE) algorithm, and the local search phase, utilizing Simulated Annealing, are distributed over available compute cores. Our results suggest that the proposed parallelization strategy is capable of solving the compactness-driven regionalization problem both efficiently and effectively. We expect this work to advance CyberGIS research by extending its application areas into the regionalization world and to make a contribution to the spatial analysis community by proposing this parallelization strategy to solve large regionalization problems efficiently.

Additional information

Funding

This work was supported by the National Institutes of Health [grant number R37AG009253]; and the Yale University FAS Imaging Fund.

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